Trematomus bernacchii (emerald rockcod): 117471622
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Entry
117471622 CDS
T09643
Symbol
itgb6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
tben04810
Regulation of actin cytoskeleton
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117471622 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117471622 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117471622 (itgb6)
04810 Regulation of actin cytoskeleton
117471622 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117471622 (itgb6)
04515 Cell adhesion molecules [BR:
tben04515
]
117471622 (itgb6)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117471622 (itgb6)
Cell adhesion molecules [BR:
tben04515
]
Integrins
Integrin beta subunits
117471622 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
117471622
NCBI-ProteinID:
XP_033972639
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MALKLRPGTQVTFQVKIQHTEDYPVDVYYLMDLSASMIDDLVMIKDLGTSLSKEMAKLTS
KFRMGFGSFVEKPVLPFIKITEEELANPCRGVGSHCLPTFGYKHVLSLTSSTDKFNKIIA
MQRVSANIDVPECGFDAVMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMAGIVIP
NDGQCHLDVNNEYSMSTVLEYPTLGQLIDKVVENNILLIFAVTEGQQNNYKNYAHLIPGA
TVGVVAKDSRNILELIVTAYKELRSEIELEVLGDTEELHMSFTAICPNGIVLHDQKRCSN
IKPGETVVFNVTVELPECLSGVRHFSLKPVGLQDSLEVELESLCSCDCRHPPKANSSQCT
EGQGAFQCGVCVCHPGFLGAECECNEESALLSNCLANNESEICSGQGQCYCGECVCHASS
FGRIYGPYCECNNYSCVRFRGELCGGHGVCDCGECHCESGWTGEYCNCSSSTDACMSEDG
ALCSGQGRCECGHCVCSVPGASGDKCEKCPTCGDACNSARDCVECHLQDDDDAELCDQKC
SVPKISINTTADYVKSPSMKCKLMMVDECWVSFNVVGGETGITAYDLLKFGCPEPPNIPM
IILGVSLSIVCIGLILLAVWKVLVSVHDRKEVAKFEAERAKAKWQTGTNPLFKSSTSTFK
NVTYKKTEREKIITLGHY
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaagctgcgacctggcactcaggtgactttccaggtcaagattcaacacaca
gaggactatcctgtggacgtctactacctgatggacctgtcggcgtccatgatcgacgat
cttgtgatgatcaaagacttgggcacctctctatctaaagagatggccaagctcaccagt
aaattccgaatgggctttggttcctttgtggagaaacccgtcctgcccttcatcaagatc
acagaagaagagctggctaacccctgcaggggtgtaggctcccactgcctgccaacattt
ggctataaacacgtcttgtctctgacgagcagtactgacaagttcaacaaaataattgca
atgcagcgcgtttcagcaaatattgatgtgccagagtgtggctttgacgctgtcatgcag
gcagctgtttgtggggacaaaataggctggaggaatgactcgatgcgtttgctggtgttt
gtcagtgatgctgactcacactttgggatggacagtaagatggctggcatcgtgattccc
aacgatggtcagtgtcacctggatgtcaacaacgaatactccatgtccacagtgctggag
tatcccactcttggtcagctgattgataaggtggtggagaacaacatcctactgatattt
gctgtaacagaaggacaacaaaataactacaagaactatgcacatctcatacctggcgcc
acagttggagttgtggcgaaggattcgcggaacatcctggaactgattgtaacagcgtac
aaagaactgcgttcggagatcgagctcgaggtccttggagacacagaagagctccacatg
tcttttacagccatttgcccaaatgggatcgtcctccatgatcagaagcgctgctccaac
atcaaacctggagaaacggtagtgttcaacgtgactgtggagctgcctgaatgcctgtcc
ggagttcggcacttctccctgaagccggtgggtttacaggacagtctggaggtggaactg
gagtctctctgctcgtgtgactgcaggcatcctcctaaagcaaacagcagccagtgcacc
gagggccagggggctttccagtgtggagtgtgtgtgtgtcacccggggttcctgggagcc
gagtgtgaatgcaatgaggaaagcgctttgttgagcaactgcctcgcaaacaatgagtct
gagatatgcagtggtcaggggcagtgctactgcggagagtgtgtgtgtcatgcttccagt
tttggacgcatctacggaccttactgcgagtgtaacaactactcctgtgttcgtttccgg
ggggagctctgtggaggccacggggtgtgtgactgcggggagtgtcactgtgaaagcgga
tggacaggggagtactgtaactgcagcagcagcactgatgcgtgcatgtcagaggatgga
gctctctgcagcgggcaggggaggtgcgagtgtggccactgtgtgtgctcggtacctgga
gcatctggggacaagtgtgagaagtgcccaacatgcggagacgcctgtaactctgcaagg
gactgtgttgagtgccatctgcaagatgacgacgatgcagagttgtgtgatcaaaagtgc
agcgtccctaaaatatccatcaacacgactgcagattatgtcaagagcccttctatgaaa
tgcaagctgatgatggtggatgagtgctgggtatcatttaatgtggtaggaggtgagaca
gggatcacggcctatgatctcctgaagtttggttgcccggagccacctaacatccccatg
attattctcggcgtctccctatccattgtgtgtatcggcctgatcctcctggcagtgtgg
aaggtgctcgtgtctgtccacgatcgcaaagaggtggcaaagtttgaggccgagagggca
aaggcaaaatggcagacggggaccaaccctttgttcaaaagctcaacgtctacattcaaa
aatgtaacttataagaaaacagagagagaaaagatcattacgctgggtcactactga
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