Trematomus bernacchii (emerald rockcod): 117471695
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Entry
117471695 CDS
T09643
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117471695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471695
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117471695
Membrane trafficking [BR:
tben04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117471695
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117471695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
FAM92
Phage_T7_Gp13
GrpE
Motif
Other DBs
NCBI-GeneID:
117471695
NCBI-ProteinID:
XP_033972767
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MAASSDRIPPPLPATEEPGAATPDMADGDSDEGEDIFVNNSVPVAVSRGVSQPDNVNEQT
PDLFGEEEAGSTTAKSNGVHSDDDNDLFAEAHVELNTPGGSAPKEPSSSSGLRPASSFTT
SPAALQPTSLEQMEEDEAEDSFDVDVAVTNPEKVGDGMGAYVAYKVSTRTSLAMFRNKTF
SVRRRFSDFLGLYEKLSVKQSLHGFIIPPPPEKSVVGMTKVKVGMDDPSSVEFVERRRGA
LERYLQRVVSHPSLLQDPDVREFLEREELPRAVSTQALSGAGFLKMINKASDAVNKMTIK
MNESDTWFEDKFQEMENEEQQLRKLQAVVDSLVNHRKELCGSTAVFAKSMAMLGNSEDNT
ALSRALSQLAEVEDKMEQLHQEQAASDFFIFAELLADYIRLMGAMRGCFDHRVRAWQRWQ
ESQSTLQKKRESEAKLLWANKPDKLQQAKEEITEWESRVTQYEKDFDRIGMTVRKEVLRF
EKEKAKDFKSQIMKYLDAMLQSQQRIVKFWEAFLPEAEAIA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagctcagatcggattcctcctcctctccctgccacggaggagccgggagcc
gcaacgcctgacatggcagatggggacagcgacgagggagaagacatatttgttaataac
agtgtccctgtagctgtgagtcgaggagtttctcagcctgataatgtcaatgaacagacc
ccagatctgtttggcgaggaggaggccggcagcacgacagccaaatccaacggagttcac
tcagatgatgacaacgacctgtttgctgaggcgcatgtggagctgaacacgcccggaggc
tctgccccgaaggagccctcctcttcctctggccttcgtccagcctcctcgttcactacg
agccctgcggccctgcagcccacctccttggagcagatggaggaggacgaggcagaggac
agttttgatgtggatgttgcggtcacaaaccctgagaaagttggagatggaatgggtgct
tatgtggcctacaaagtatccaccaggacgtccttggccatgttcaggaataaaaccttc
tctgtgagaaggcgctttagtgacttcctgggtctttacgagaagctgtccgtcaaacag
tcgctccatggcttcattattccaccaccacccgagaaaagtgtcgtaggaatgaccaaa
gtgaaggtgggaatggacgacccgtcatctgtagagtttgtggagagaagaagaggcgct
ctggagagatatcttcagagagtagtgtctcacccatcgttactacaggaccctgatgtc
cgtgagttcttggagagagaggagttacccagagcagtgagcacccaggctctgagtgga
gctggcttcctcaaaatgatcaataaggcatcggatgctgtcaacaagatgaccatcaag
atgaatgagtctgacacttggtttgaggacaagttccaggagatggaaaacgaggagcag
cagttgaggaagctgcaggccgtggtcgactccctggtcaaccacaggaaggagctgtgt
gggagcacggcagtatttgccaaaagtatggccatgctgggaaactctgaggacaacacg
gccctgtcccgggccctgtcccagctggcagaggtggaggacaagatggagcagctgcat
caggagcaggcagccagcgacttcttcatctttgctgaactgctggccgactacatccgc
ctgatgggtgctatgcgcgggtgttttgaccatcgtgtgcgggcgtggcagcgatggcag
gagtctcagagcacactccagaagaagagagagtctgaggccaagctgctgtgggccaac
aagccagacaaactgcagcaggccaaagaagagatcactgagtgggagtctagggttact
cagtacgagaaagattttgacaggattggcatgactgtacgcaaggaggttctcaggttt
gagaaagaaaaagccaaggacttcaagagccagataatgaaatatctggatgcaatgctg
cagtctcaacaacggattgtaaagttttgggaggcgttcctgcctgaggcggaggcaata
gcttaa
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