Trematomus bernacchii (emerald rockcod): 117471739
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Entry
117471739 CDS
T09643
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04260
Cardiac muscle contraction
tben04261
Adrenergic signaling in cardiomyocytes
tben04814
Motor proteins
tben04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117471739
04820 Cytoskeleton in muscle cells
117471739
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117471739
04261 Adrenergic signaling in cardiomyocytes
117471739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117471739
04147 Exosome [BR:
tben04147
]
117471739
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
117471739
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of microglial cells
117471739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
Sec2p
DUF3450
Rod_CreS
Lebercilin
HAUS1
DUF745
TMF_DNA_bd
ERM_helical
Laminin_I
ATG16
CC_Bre1
DUF1664
XhlA
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
117471739
NCBI-ProteinID:
XP_033972831
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDKSKQLEDDLLALQKKLKSTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLSTALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAEMSEGKCSELDEELRTVQNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKSIDDLEGKMFTPLSQKLVDHHLSPLQHSPTFCLCISFLPRNYCALGCCC
CHPFLHFSYRTLSRFSSCKINTLPSLPAFPPFSCHVSSFLFVPPFLISFLLSLSFNLFC
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggac
agagctgaacaggccgagtcagacaagaaagcagccgaggacaagagcaaacagcttgag
gatgacctgttagcactgcagaagaagctgaagtcaactgaggatgagttggacaagtac
tctgaggccctgaaggacgcccaggagaaacttgagctcgctgagaagaaagccacagat
gctgaggcagatgtagcttccctgaacagacgtatccagctggttgaggaggagttggac
cgggctcaggagcgtctgtccacggcgctgaccaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggacgaggagaag
atggagttgcaggagatccagctgaaggaggccaaacacattgcagaagaagctgaccgc
aaatacgaagaggtggcacgtaagcttgtgatcattgagagtgacttggaacgtacagaa
gagcgcgctgagatgtctgaaggaaaatgctctgagctcgacgaggagctgagaaccgta
cagaacaacctgaagtctctggaggcccaggcagaaaagtactcgcagaaggaggacaag
tacgaggaggagatcaagattctcacagacaagttgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagagcattgatgacctggagggtaaaatg
tttacacccctctcccagaagctggttgatcatcacctctctcctctgcagcacagccca
actttctgtctctgtatttcttttctgccccgtaactactgcgcactgggttgttgctgc
tgccatcccttccttcatttctcatacagaactttgagccgtttttcttcctgtaaaata
aacacacttccatctctgccagcttttccccctttctcctgccatgtttcttcattttta
tttgtcccaccttttttaatttcgttcctgttgtctttgtcttttaatttattttgttga
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