Trematomus bernacchii (emerald rockcod): 117471771
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Entry
117471771 CDS
T09643
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117471771
Membrane trafficking [BR:
tben04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117471771
BRITE hierarchy
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
117471771
NCBI-ProteinID:
XP_033972874
EnsemblRapid:
ENSTBNG00005002052
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKSAKPKAPITDVAVVIRSMGEETP
PGFTCVEETPTGHSADLNNGGLMVPQIFLCYRRGRDKPPLTDLGVLYEWKERLKPGCQLI
QTTPSGRPANISGNSSQRIYVTYRRAPESQPHSALALTDICIIVPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGSSGEKVYGAAIQFYEPFPQVCLTDVQRSQLGLLSPDPVQ
PASSSCTETSSSSPAKAQCSVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISCPHALPIE
KHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQNLGPENAV
TLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWQCPYIPLCPLALADVLSAPCPF
IVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKSCKNLMNVLSNLHQQ
LVEGQQRPDGLLELSMNDLTELSCGKSLHTLELEIQEAFLRFMAAILKGYRSFLRPITQA
PSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDD
CVDKLYNSERSADKAGKVDADRPEESRLIEIDESQRSEHTVFITPPELPPLPEGEEHPLC
YRYDGFPVLTLDLFDPVEGLRTPSSRLTAKQSCPTSPAPMFRRTKQEIKTAQKIAKKYSS
IPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLGKMQAKKLQPPDEVCYRV
LMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLR
NVVLGVAQFKQALRRQAAHTQSPLSDGSDLDAVSHGSLDSSADTNLGPFASDSAKVDPID
DKSSTGDQSDLGYNSLSKEEVRRGDPGAPDSKDDKKESDCSSLSETESAKGSKDCLPQLD
MELHSSFKPRGIVRSSYPYDEASCKPKSSVSAGHVAGLLFSSSLDDIGEVNGNRLLRKHR
SALEEVVGSSGSALDWQGGRGRQLSGDKVGSSGSGTTVLGLGMSQGETDPDKIAGHMGAD
VKILSGAKFSQSKRPRSLALGGIEGAAASRSLDHREEEEEAEGQDSSDEDRGNTEAIFDL
EDLDLDKPATGAGISSHKCNKKPVGRSVSYGGVSSMTTRGTVKRTDIQTGYDPLSILVAE
TQSEEQSEDRYPEGDEDSTPSARRHLAREIELYMNHMGSPLSSRTPSMDLQDSASPLLLH
PSSLSAPRRASLPHSSPLRAAGMPRSRTFHPPSPSQSVSRQRLLSSPSCHSSSTTPSASP
RPSPCRERTDRMSLASPSPSSSSFALDTLITPTLDVFKTSMFSAGKGVAEKASRWYSRLS
TYTTPTKDGHSDRLSISSLGFGDPDCASLLDDEDCDGSLISPQRNGPSGPRRSPRRSPLR
STQHSPSAGHSLGRPTSLFPGCVLSPPGFPLPDRSDLGSSRYTSSTSIFNNYAMELLISS
CSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVELRDMRGPGRLFLKGS
PSVDEEMTSSYSTSTGLDTGTSTLSTPCPKTAAFPPSPGIAVQECAGSGRTRSTNAEGIN
IPSDQRQEGPSPGGHMARSISTFCPQDEAPTIDHRLPTSGSLPSRLNEATDPLNMEWRLH
NPEPVTVPYLSPLVLWKELESLLENEGDSVITEADMVDQHPIIYWNLVWYFRRLDLPSNL
PGLMLTSEHCNRGSQVPRHWMSEDSKHVLIQILWDNLKLHQDSIQPLYILWNTFRLNCTL
LLENVGYPLSRPVPEEERPFSEELLQSVVRSIQRNDLSRPMAQLLQLLGTTLGVKRQRSL
YRDILFLSLVALGKDNIDIDAFDREYKLAYDRLLPSVVKLTHNCDRPPSTGVMECRRTFG
EPYL
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggccctcgtgtagccgactactttgtggtggccggtctgacagac
ccgtccaagccgttggaccaggagatccactttgatgacgtgtgccacaagtcggccaag
cctaaggcgcccatcactgatgtcgccgtggtgatccgctccatgggcgaggagacgccg
cctgggttcacctgtgtagaggaaaccccaacaggccattcagctgatctgaacaatggc
ggcctcatggtgccccagatcttcctctgctaccggagaggtcgcgacaagccacccctc
actgacctgggcgtgctgtacgagtggaaggagcgcctgaagccgggctgccagctgatc
cagaccacaccctccggtcgccccgccaacatcagcggaaactcctcccagcgcatctac
gtcacctaccgccgggcccctgagagccagccacacagcgcgctggccctcaccgacatc
tgcatcatcgtcccgagcaagggagagacgcccccccacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctctgtctacctgtgttataagaagtctgtggcc
aaaaccaacacaatagcctacaaagcaggtttattcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgtccctctcttctgccttcccatgggggccacgatt
gagtgctggccagcaaacaccaaatactccctccccgtgttctccacctttgtcctcacc
ggatcctctggagagaaggtgtacggtgccgccatccagttctacgagcccttcccccag
gtgtgtctgaccgatgtgcagcgctcccagctgggtctcttgagtccagatccagtacaa
ccagcctcctccagctgtacggagacatccagcagcagcccggccaaagcccaatgctcc
gtctacaccaacaagtgcatctgtctgctttcccactggcccttcttcgacgctttccgc
aagttcctcacattcctatatcgctactccatctcctgccctcacgccctgcccatcgag
aagcacatctctcattttatgcacaaagttcccttcccttcctctcagaggcctcgcatc
ctggtgcagctttcccctcatgacagcctgatgttgagccagccagtgtcttctccctta
ccgctcagcggtggtcgattttccacgctgctccagaacctcggaccagagaacgccgtc
accctgctggtgtttgccgtcactgaacacaagatcctggtgcactctttacgccccgcc
gtgctgaccagcgtcaccgaggctctggtgtcgatgatcttcccgttccactggcagtgc
ccgtatattcctctgtgcccactggcgctggctgacgtattaagcgccccctgtccattc
atcgtaggagtggactcccgctactttgatctttatgaccctccaccagatgtgagctgc
gtggatctggacacaaacaccatcttccacaatgaagataagcgagccctcacgtggaag
atcctgccaaagaaatcctgtaaaaacctgatgaatgtgctgagcaatctccaccagcag
ctggtcgagggtcagcagcgtcctgacgggctgctggagctgagcatgaatgatttgaca
gagttgagctgtggtaagagcctccacacgctggagctggagatccaggaagcctttctg
cgcttcatggcggccattttgaaaggctaccgctcattcttgcgacccatcacccaggca
ccttctgagaaagcgacggacgccagctccctctttgacctgcaagggttcttaaagagc
cgggaccgctcccatcagaagttctactcgctgatgaccaaaacgcaaatgttcatccgc
tttattgaggaatgttctttcgtcagcgacaaagacgccagtctggccttcttcgacgac
tgtgtggacaaactctacaattccgagcggagtgcagacaaagcaggcaaggtggacgct
gacaggccggaggagagccggctgatagagattgatgagtctcagcgcagcgagcacaca
gtcttcatcacgcctccagagctgccccccctgcctgagggggaggaacatccactctgc
tacaggtacgatggcttcccagtgttaactcttgacctgtttgaccctgtggagggcctg
cggaccccctcctcccgcctcactgccaagcaaagctgtcccaccagccctgcccccatg
ttcagacgcaccaagcaggagatcaaaacagcccagaagatagccaagaagtactcgtcc
atccctcagctgtggtccaagtgcctgctccgtcactgctacggcctgtggttcatctgc
ctgccagcgtacgtcaaggtgtgccactccaaggttcgggcgctgcgcacggcctacgac
gtcctcgggaagatgcaggctaagaaactgcagccacctgatgaggtctgttaccgggtg
ctgatgcagctgtgtggacagtacggccaacctgtcctggcagtcagggtcctctttgag
atgaagaaggccggagtccaccccaacgcaatcacctatggctactacaacaaggcggtg
ttggagagcacgtggccctccagcaccagaggagggtacttcctgtggatgaagctgaga
aatgtagttctgggagtggcccagttcaaacaggccctacgacgacaggctgcccacaca
cagagtcctctgtcagatggcagcgacctggacgctgtgagtcacggcagcctggatagc
tctgccgacactaacctgggccccttcgcctctgactccgccaaagtagaccccattgat
gataaatctagcacaggggatcaatcggatctgggttataactcactgtccaaggaggag
gtccggagaggagaccccggcgctccggactccaaagatgacaagaaggagagcgactgc
agctccttgtcagagacagagagcgccaaggggagcaaagactgcctccctcagctggac
atggagcttcactcgtccttcaaaccccgcggcattgtgcgcagcagctatccgtatgac
gaagcctcctgtaagcccaagagctccgtcagcgcgggccatgttgcaggcctcctcttt
tcctcctccctggacgacatcggtgaggtcaacggcaacagattgctcaggaaacacagg
agtgctctggaggaggtggtgggcagcagcggctcggctctcgactggcagggggggagg
ggccgccagctgagcggggacaaggtgggcagcagcggcagcggcaccactgtcctgggc
ctggggatgagccagggggaaacagacccagataagatcgcgggacacatgggcgcagac
gtcaaaattctctctggtgccaaattcagtcagagtaagagacctcgttcgctggctctg
ggcgggatagagggggcggctgcctccagaagtcttgatcacagggaggaagaggaagag
gcggagggacaggactccagtgatgaggacagaggtaacacagaggccatttttgatttg
gaggatctggatttagacaagcccgccacaggggctggcatcagctcacacaaatgtaac
aagaaacctgtcggacgcagtgtgagctacggtggcgtgagctccatgacgaccagagga
actgtgaagcgcacagacatacagacaggctacgaccctctgtccatcctggtggcagag
acacagtccgaggagcagagtgaggaccggtacccagagggggacgaggacagcactccc
agcgcccgaaggcacctggccagagagatcgagctctacatgaaccacatgggcagcccg
ctgagcagcaggacccccagcatggacctgcaggactccgccagccccctcctcctccac
ccctcctccctctcggccccccgcagagccagcctgccccacagctcccccctcagggct
gctgggatgccgcgctcccgcaccttccacccgccctcgccctcccagtccgtctcacgc
cagcgcctgctctcgtccccctcctgccacagctccagcaccacccccagtgccagcccc
cgccccagcccctgcagggaaaggacggacaggatgagcctggcgtcgccttccccctcc
tcttcctctttcgctctggacactctgatcacaccaacgctcgatgtattcaagaccagc
atgttctccgctgggaagggcgtggcagagaaggccagccgctggtactcccgcctctcc
acatacacaacgcctaccaaggacggtcacagtgaccgcctgagtatttcctcccttggc
tttggagatccagactgcgcctcgctgctggatgacgaggactgtgatggctccttgatc
tctccacagaggaacggcccctcagggccccgcaggagcccccgacgcagccccctgcgc
agcacacagcacagcccctctgccggccacagcctgggcagacccacatctctgttccct
ggatgtgtgctctccccccccggcttccctctgccagacaggtcggacctcggctcttca
cgctacaccagcagcaccagcatcttcaacaactacgccatggagctgctgatctccagc
tgttcccgctgtaagacgtgcgactgcctggtgtacgatgaggagatcatggccggctgg
actgcggacgactccaacctgaacaccacctgccccttctgtggaaaccccttcctgccc
ttcctcaacgtggagctcagggacatgcgaggccccggcaggctttttctgaagggcagc
ccgtcggtggacgaggagatgacctcgtcgtactccacctccacgggtttggacacgggg
acgtccaccttgtccaccccgtgtcctaaaacagctgcctttcctccctcccctgggatc
gctgtccaggagtgcgccgggagtggaaggactcgatcgaccaacgctgaaggtatcaac
atcccgtctgaccagcggcaggagggtccgtcccccggggggcacatggcccgcagcatc
agcaccttctgtccccaggacgaagcgccaacaattgaccaccgtttgccgacgtcaggc
agcctgcccagccgtctgaatgaagccacagacccgctgaatatggagtggcggctccac
aaccctgagccggtgacggtgccctacctgagcccgctggtgctgtggaaggagctggag
agcctgctggagaacgagggcgactcggtgatcaccgaggccgacatggtggaccagcat
cccatcatctactggaacctggtctggtacttcaggcgcctggacctgcccagcaacctg
cccggactcatgctcacctcggagcactgcaacagaggctcccaggttcctcgtcactgg
atgtcggaggacagtaaacacgtgttgatccagatcctgtgggacaacctgaagctgcac
caggactccatccagcctctctacatcctctggaacacattcaggcttaattgtactctg
ttgttagagaacgtggggtaccctctgtcccggccggtcccggaggaggagaggccgttc
agcgaggagctgctgcagagcgtggtgaggagcatccagaggaacgacctgagccggccc
atggcccagctgctgcagctgctgggcaccacgctgggggtcaaacggcagaggagtttg
tacagagacatcctcttcctctccctggtggctctgggaaaagataacatcgatattgac
gcatttgatcgagagtacaagctggcgtacgaccgcctcctgccgagcgtagtgaagctg
acccacaactgtgaccgcccccccagcaccggggtcatggagtgccgcaggacctttggg
gagccttacctgtaa
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integrated database retrieval system
