Trematomus bernacchii (emerald rockcod): 117471787
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Entry
117471787 CDS
T09643
Symbol
chrna5
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117471787 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117471787 (chrna5)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117471787 (chrna5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
117471787
NCBI-ProteinID:
XP_033972897
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MTTNVWMKQEWTDRKLRWNPDDYQGLTAIRVPSNRIWLPDIVLYDNSDGRFEGTVTKAVV
KYDGTITWTPPANYKSACTIDVTFFPFDLQNCSMKFGSWTYDGSQVDITLEDFHVDKRDY
FDNGEWEIVKATGSRGLRTDSSCTYPTITYYFIIRRLPLFYTLFLIIPCIGLSFLTILVF
YLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSSSKTIPLIGEYLVFTMIFVTLSICITV
FAINIHHRSSSTHHGMAPWVRRIFLHRLPKLLCMRSHVDRYSPADIARAGGLGMMKNSKS
ELTPLLYTRHNLQAALDSIRYITMHVVKENEVREVVQDWKCVAQVLDRVFLWAFLVVSIL
GSALLFIPVIYKWASIIVPNHAGSTL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaatgtgtggatgaaacaggagtggactgacaggaaactaagatggaatcct
gatgactatcagggccttacagccatccgagtcccttctaacaggatctggcttcccgac
atcgtactgtacgataattcagatgggcgtttcgagggaactgtcactaaggcagttgtt
aagtatgatgggaccataacatggacaccaccagccaattacaaatcagcctgcaccatt
gatgtcaccttcttcccttttgacctccagaactgctcaatgaagtttggctcttggaca
tatgatggctcccaggtggacataactcttgaggacttccacgtggacaagcgggactat
tttgacaacggtgaatgggagatagtgaaggccacaggcagccgtggtctgaggacagac
agcagctgtacctatcccaccatcacctactacttcatcatccgccggttgcctcttttc
tacacactcttcctcatcataccctgcattggcctgtccttcctcaccatcctcgtcttc
tatctgccctctaacggtggcgagaagatctctctctgcacctctgtcctggtgtcgctc
acagttttcctcctggtcattgaggaaatcattccttcctcttccaagactatccctctc
atcggggagtacctggtcttcactatgatcttcgtcacactctccatctgcatcacagtc
tttgccatcaacatccaccatcgctcctcctctacacaccatggcatggcaccgtgggtg
aggaggatcttcctacatcgactgcctaagctgctgtgcatgcgcagccatgtggaccga
tactctccagctgatatagccagagcaggaggactgggtatgatgaagaactcaaaatct
gaacttacacctctgctctacaccagacataacctacaagcagctttggattctattcgc
tacataaccatgcatgtggttaaagaaaatgaggtccgagaggtggttcaagactggaaa
tgtgtagcccaggtcctggatcgagtgtttctttgggccttcctcgtggtgtcgatcctg
ggctctgcgctcctcttcattcctgttatttacaaatgggccagcataatcgtccctaac
catgctggaagtaccctctaa
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