KEGG   Trematomus bernacchii (emerald rockcod): 117471829
Entry
117471829         CDS       T09643                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117471829
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tben01009]
    117471829
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tben03021]
    117471829
Protein phosphatases and associated proteins [BR:tben01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117471829
Transcription machinery [BR:tben03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117471829
    Little elongation complex (LEC)
     117471829
SSDB
Motif
Pfam: ELL Occludin_ELL SR-25 UBR1-like_wing Med19
Other DBs
NCBI-GeneID: 117471829
NCBI-ProteinID: XP_033972956
LinkDB
Position
Unknown
AA seq 603 aa
MASLRQEHHYGLSCGKNNKNSPNRTLYHVKLTDTALRALEAFQNLKGSLPSEPSICFKGN
QGNIKIPAPTSESPSALRVFSFYLSSDSKDQPQASFDCIHQYVTSDGREQLEGQGIIQDK
ITVCATDDSYQMTRERMSQVEKDSWSRAAIEIKPGATHPSKCVKFQKRPLSTSDSSLFKN
STNNRRIGGTATPTQKPLRERIIHLLALKPYRKPELLLWLEREKADPKDKAELGAILDEV
ARVNPKDSSYLLRDDFFKHVQRAWPGYSEEERPLISRLLARKLQPHISQPSRNLPANVSK
TSEDTTLHQSPAKNPAVKRPVPSDSLESLAVKKQRLVDQRLQQQPTVNGLLNNKGHVISA
PSLNPSFHTKTEFQRTTNQTGNQNGLPGCHSGFPLMHKLSSTSDTPVSESREQGPKVSSQ
PPQGDSDCSHQPPANSQHKKKKSKKHKDKERERLKENKGSEWFETSPDLKQNPDKLDNPD
ITNAVASEEKPDYVLSYGPIMTLEQRERYQEDFCAEYDEYKDLHSRIATITHMFVQLGSK
IKSLPPGTREYKIMEDQILEKYSKYRKKFPGYREEKKRCEYLHEKLSYIKQLIADYEVSQ
ASS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcttcgctcaggcaggagcaccactacgggctctcctgtggaaaaaataacaaaaac
agcccaaacaggacgctttaccatgtcaagctcacggacacggctctcagggcgctggag
gctttccaaaacctcaagggatctttaccaagtgaaccatcaatttgcttcaaaggaaac
caagggaacatcaagatcccagctcccacttcagagtcgccttctgctcttcgcgtcttc
tccttctacttatccagcgacagcaaagaccaacctcaagccagctttgactgcatccat
caatatgtcacaagtgacggccgagagcaactggaaggtcaaggcatcatccaggacaag
atcacagtttgcgccacggacgactcctaccagatgactcgtgagaggatgtctcaggtg
gagaaggacagctggagccgcgccgccatcgagatcaaacccggagccacacatccaagt
aaatgtgtgaagttccagaagcggcctctgtctacatcagacagcagtttattcaagaac
tccaccaacaaccggaggatcggcggtacggccacgccgacccagaagcccttgagggag
cgcatcatccacctcctggctctgaaaccgtacagaaaaccggagctgctgctgtggctg
gagagagaaaaagccgaccccaaggacaaggccgagctgggggccatactggacgaggtg
gccagagtgaatcccaaggacagcagctacctgctgagggatgacttcttcaaacatgtg
cagagggcctggccgggatacagcgaggaggagaggccgctgatcagcaggctgctggcc
aggaagttgcagccgcacatcagccagccatcgaggaatcttccagcaaatgtgtcaaag
acctcagaggatacaacgctacatcagagcccagcaaagaatcctgcagtgaaacgtccc
gtgccttctgactctctggaaagcctcgctgttaagaaacaaagacttgtggaccagagg
ttgcaacagcagcccacagtaaacggactcttaaacaacaaaggacacgtcatttcagct
ccttccctcaaccccagtttccacacaaagactgagtttcaacggacaactaaccaaact
ggaaaccaaaatggcttaccaggatgccacagtggctttcctctaatgcacaaactgtct
agcacctctgacacaccggtctcagagagcagggaacagggacccaaagtaagcagccag
ccgccacagggcgactccgactgctctcaccagccgcccgccaacagccagcacaagaag
aagaaatctaaaaagcacaaagacaaggagcgggagaggttaaaagaaaacaagggcagc
gaatggttcgagacgagtcctgatctcaagcagaacccggacaaacttgacaatcctgac
atcacaaatgctgtggcctctgaggagaaaccagattacgtgctctcatacggccccata
atgactttggagcagcgtgagcggtaccaggaggatttctgtgcagagtacgatgaatac
aaagacctccactcgcggatcgccaccattactcacatgtttgttcagctaggatccaag
atcaaaagcttgccccctggcacacgagaatataagataatggaagaccaaatactagaa
aagtactccaagtatcgaaagaagttcccaggctaccgggaagagaagaaacgctgtgaa
tatctccatgagaaactgtcctacatcaaacagctcatcgcagactacgaagtctctcag
gcttcttcatag

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