KEGG   Trematomus bernacchii (emerald rockcod): 117471841
Entry
117471841         CDS       T09643                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117471841 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tben03400]
    117471841 (ercc5)
DNA repair and recombination proteins [BR:tben03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117471841 (ercc5)
Motif
Pfam: XPG_N XPG_I 5_3_exonuc DUF6879
Other DBs
NCBI-GeneID: 117471841
NCBI-ProteinID: XP_033972971
EnsemblRapid: ENSTBNG00005024865
LinkDB
Position
Unknown
AA seq 1159 aa
MGVHGLWKLLESTGKPVNPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RVCKLLFFRIRPVFVFDGDAPLLKKQTLALRRQRKEELTQESKQTNDKLLKTFLKRQAIK
AALGDASKDPLPSLSTVRRDEVDDMYVLPALPAAEEKDKSSSEEEEEKELEETDETDEGY
HMYQGELYENPNSVNINSEEFASMPLEMKHEILKEMKEFSKRRRTMYQKPPERSGDFSQY
QLAGLLQRNHLNQRLRGVESEMCQLSAGSAPQLFQQDGDQQSHSVESRRLVSEDNSHYIL
IKGSKKIEPAPESRPAAAAWAGSVLTGSKRRAVDRPEPLWRPVAEEGPDGWGHASEDSKP
SVSKPFVSKPSVSKPSFGDTSPPSPRTLKAIQGAMDDSSDEDKVDQDRKEGGVSPRTLLA
IQQALAEEEGGFARHGTFINSTATKLQVNVPPPAPHVVISSSEEEPDTLPKGTSDFKGNP
GKTGQSVHVKDVLLDSSSEDETEAVIGERNKAVHFAPLQQPHKTGLSSEGETQKGKLAED
MKIGSRGQEELEGRESEHGLMSKPEGAAASSQITLSNNPSAALCVKPLSAEREAGHPVLL
KQESNKVIEALEERNGDDVKLQRSEESDSEESFIEVSDEEFEEEETDDSLVITGDKGPPD
EVNKAEQEEESKKGLTEVPAAALQVEEEEERKIQSEEEELEEGTETESSSTPAVNEWEHF
DVEELQALESSLQVEQSSLRELKQQQERMANTVTGQMQLESQELLRLFGVPYLVAPMEAE
AQCAALDRADHTNGTITDDSDVWLFGGRHVYRNFFNQDKYVEHFQYSDLQNQLGLDRTKL
INLAYLLGSDYTEGLPGVGYVTGMELLNEFTGPGLEPLTQLREWWSAAQQNKRLSSDPRD
TKVKKKLRTLKLHPGFPNPAVAQAYLQPAVDQADSFFSWGRPQLDMIKEFCLNRFGWSSR
RTEDTLQPVIKQLNTQQTQLRIDSFFRLEQQEKQAIRSQRLRRAVTCMKRKEREGGDEGE
DSEEDLPSPSPSKSKKGKAPSKSPKKVGGGEREVGRSVSGGGFLGSEEVVESPPPPPSLK
DVSSSRQESLPVKAVPQPTNTLPQRASSNSSSGEDSDDGGGEVAMVTARSVFDGGRRGRG
AKSTRGRGSTRGKRRGTKS
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgggagtgcatggactgtggaagctgctggagagcacagggaagcccgtcaaccctgag
actctggagggaaagatccttgctgttgacatcagtatatggctgaaccaggcagtgaaa
ggggtgagggaccgtgaaggtaacagtgtgcagaacgcccacctcctcactctcttccac
cgcgtctgtaagctgctcttcttccgcatcaggcccgtatttgtgtttgatggggacgca
ccgctgctgaagaaacagactctggctttgaggaggcagaggaaagaggagctgacccaa
gagtccaaacagacgaatgataaactcctcaagacgttcctgaagagacaagctatcaaa
gctgcacttggagacgccagtaaggatcctctacccagcctctccactgtgaggagagat
gaagtggacgacatgtacgttctgccagccctgccagctgcagaggagaaagacaaaagc
agttcagaggaggaggaggagaaagagttggaggagacagatgagacagatgagggatat
catatgtatcagggagaattatatgaaaaccctaactcagtgaacatcaactcagaagag
tttgccagcatgccgcttgaaatgaaacatgagatactcaaagaaatgaaagagttttcc
aaaaggcgtcggaccatgtaccagaaacccccagagcgctcaggagacttctcacagtac
cagctggccggcctgctgcagaggaaccatctgaaccagcgtctgcggggcgtggagagc
gagatgtgccagctgagtgccggcagcgctccacagctcttccaacaggacggggaccag
cagagtcacagcgtggagtcacgccgcctggtttcagaggacaattcccactacatactt
attaaaggctccaaaaagatagaacccgcccctgagagccgccctgcagctgcagcctgg
gccggcagcgtcctgacgggctctaagagacgagcggtggacagaccggagcccctgtgg
cgtcctgtagcagaggaggggccagacgggtggggtcacgcctcagaagactccaaaccc
tctgtgtccaaaccctttgtctccaaaccctctgtctccaaaccttcttttggagacaca
tccccaccctcacctcgtacactcaaggcgatccaaggtgcaatggatgacagctcagac
gaggacaaggtggaccaagacaggaaggaagggggtgtgtccccccggaccctgctcgca
atccaacaagctctcgctgaggaagaaggtggctttgctcgacacgggactttcatcaac
agcacggccaccaaactgcaggttaacgttcctcctcctgcgcctcacgtggtcatcagc
agctcagaggaagaaccagacactttgccaaaaggaacatccgattttaagggaaaccca
ggaaaaacaggccaaagtgtacatgtgaaagacgttttgcttgatagtagttctgaagat
gagaccgaggctgtaattggggaaagaaataaggctgttcactttgcaccactgcaacaa
cctcacaaaacagggctgagctcggaaggggagacgcagaaaggaaagttggcagaggat
atgaagattggcagtagaggacaagaagaactggagggaagagaatcagagcacgggttg
atgtcaaagccagagggtgctgctgcttccagtcaaatcacattatcgaacaatccctct
gctgcactgtgtgtgaaacctctcagtgcagagagggaggcgggacatcctgtgctgtta
aagcaggagagcaataaggtgatagaagctctagaggagaggaatggagatgatgtgaag
ttgcagcgcagcgaggagagcgactcagaagaaagcttcatcgaggtgtcagatgaagaa
tttgaagaggaggaaacagatgattcacttgtgattactggagacaaaggacctccggat
gaggtcaataaggccgagcaagaagaagagtccaagaaaggtttgacagaggttccagct
gctgctttacaagtagaggaagaagaagagaggaaaatacagagtgaagaggaagagtta
gaggagggcacagagacagaatccagctcaactccagcggtcaatgaatgggaacacttt
gatgtggaagagctgcaggctctggagagctctctgcaggtggagcagagcagcctgagg
gagctgaaacagcagcaggagaggatggccaacacagtcaccgggcagatgcagcttgag
agccaggagctgctgcggctgtttggcgtgccgtacctggtggctccgatggaggccgag
gctcagtgtgcggcactggaccgcgctgaccacactaacgggaccatcacagacgactcc
gacgtgtggctgtttggagggagacacgtctacaggaacttcttcaaccaggacaaatat
gttgaacacttccaatacagtgacctgcagaaccaactgggtctggacaggactaaactg
ataaacctggcctacctgctgggcagcgactacacagagggtctgccgggggtcgggtat
gtgacgggcatggagttactgaacgagttcacagggccgggcttggagccactcacacag
ttaagggaatggtggtcagcggcccagcagaacaagcgtctgtcttctgatcctcgggac
actaaggtgaagaagaaattgagaaccttgaaactccatcctgggtttccaaaccctgcg
gtggctcaggcctacctgcagcctgctgtggaccaggccgacagcttcttcagctggggg
cggccacaactcgacatgatcaaagaattctgtctgaatcgttttggctggagcagtcgg
aggacagaggacactcttcagcctgtgataaagcagctgaacacccagcagactcagctg
cggatcgactcgttcttccgcttggagcaacaggagaagcaggcgatccgcagccagcgg
ctccgcagagctgtcacctgcatgaagaggaaggagagggaggggggagacgagggagag
gacagtgaggaggacctgccatccccatccccatcaaaatctaagaaagggaaggcacca
agcaagagtccgaagaaagtaggaggaggagagagagaagtggggaggtccgtgtccgga
ggagggtttctggggtcggaggaagttgttgaatctcctcctcctcctccatctctgaag
gatgtgagtagcagcagacaggagtctctgccagtgaaggccgtcccccagcctactaac
actttacctcagagagccagcagcaacagcagctctggggaggacagcgatgatggtggc
ggtgaagttgctatggttacagcccgatctgtgtttgatggcggccgacgaggccgtgga
gcaaaaagcacgagggggagaggaagcacgagaggaaagagaagggggactaaatcgtga

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