Trematomus bernacchii (emerald rockcod): 117472077
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Entry
117472077 CDS
T09643
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117472077 (vsx1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117472077 (vsx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117472077
NCBI-ProteinID:
XP_033973114
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MSSGRQDEEKPRMKMHSAGFGLEKARLQGSGFRITDLLGLDPELQGGSRGPAGHLGDPPG
AAGGLSGFSFPGGGLPLGLGFLCSLAAQQPPPCFLPAHLLQARADPHYLQSLEGARDNYS
DEDCLSDRNDSKNSANSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTE
LPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESILNSAKNGMMG
SCAPWLLGEPRMHKKSVEITKKCASPREAESPRNETFCEERRGGGGGGGGGGGGEEKRKE
KEEEEELKMEEEEEEEEEEAIDLSSSSKQTEEGGRNASSPRQQSGQSDDRS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggacgccaggacgaggagaagccccggatgaagatgcattctgcgggcttt
gggttagagaaagcccggcttcagggctccgggttccggatcacggacctgctgggcctg
gacccggaactccagggggggtcccgggggcccgcgggccacctgggggaccctcccgga
gcagcggggggtctctcggggttctccttcccgggggggggtctccctctcgggctcggg
ttcctctgcagcctcgcggcccagcagccccccccctgcttcctgcccgcacacctgctg
caggcgcgcgccgacccgcactacctgcagagcctcgagggcgcaagggacaactactca
gatgaagattgtctttccgacagaaacgactcgaagaactctgcgaactctcagaagagg
aagaagaggagacacaggacggtgttcacctcccaccagctggaggagctagagaaagcc
ttccacgaggcgcattacccggacgtttacgcccgagagatgctggccatgaagacggag
ctgccggaggaccgcatccaggtgtggttccagaaccgacgggcgaaatggcgaaagaga
gagaagtgctggggccgcagcagcgtgatggcggagtacggcctctacggggcgatggtg
aggcactccatcccgctgcccgagtccatcctcaactccgccaagaacggcatgatggga
agctgtgctccatggctgctcggtgagccacgaatgcacaagaagtctgttgaaatcaca
aagaagtgtgcgagcccccgcgaggccgagtccccccgaaacgagacgttctgcgaggag
cgacgaggaggaggaggaggaggaggaggaggaggaggaggcgaggagaagaggaaggaa
aaggaggaggaggaggagctgaagatggaggaagaggaagaggaggaagaggaggaagcc
atcgacctatccagctcctcgaagcagacagaggagggggggaggaacgcctcgtcgcca
cggcaacagagcggccaatcagacgatcgcagctga
DBGET
integrated database retrieval system
