Trematomus bernacchii (emerald rockcod): 117472157
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Entry
117472157 CDS
T09643
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117472157
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117472157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Mustang
Motif
Other DBs
NCBI-GeneID:
117472157
NCBI-ProteinID:
XP_033973189
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MKGGGRGKEPPVAGEVAGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKQPVLCGQ
QQGSQLQCGSKTEEVEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATSKPVKSPSGPPVSNPRKKVWSFS
SNSTKDSPTAKKVPKTDSMPQLNFAMADPTKMGGLSMLLLAGEHALTNREIPSSTKPRSP
DAASEGNSFPGDKEEILSGTVPSRVPDSTGGSVQSAPPQLAEPSVSAPEGKPCPQSALFQ
LAEMCLASEAGQMDPVGSQSEVCPSTATPLLTEVRAEIKEERADWDDGPPPPQTSLLPLL
SSDAIPPQCSSQNARVKSKSTKKEMAKLNDNVEIPSPAKKILKKCNHAESNVDSVFSTIE
AVAKGVWKDTEETPKKKIQGSPSAGNSAVLKKKNKPKVKTFVQEKEEEMEEGSGQCGQTS
SSEVEIKEEMADVCPKQDAEEDSLGSSMEEAPHSPCSPSPSKLREEDKGKERSGEGNCDS
TAEHHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALRASDHDANWSDDSWSVS
QTGPNNPKKLKKSKSKDESSQGLGKLEEEFERKFNSLPQYSPMTFDKKGTTVVKKKKTDS
PSVQEEVSKAGKGSSPSQKKTSFHKIVRKQKLKKEKPGAVDKGALSDSTMLDSAAKAKSC
APIAIMCPDVQGANSMEMLVGSQKRKARKTKITHLVRTADGSVSPAEEDKMWDQNQEEDK
KPLPQQMLCNDKGCYSNPRAQEAERSAAAPELPAFFSLAALAEVAAMENVHRGQRGLAEN
QKKELSQTPVLISCADQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggaaggggtaaggaaccacctgttgcaggggaggtcgctggcaagcgt
cccaaacgtaaatgtctgcagtggcacccacttctctccaaaaaggctctggatttctct
gaggaggaagaagaggaggatgaagaagagctggagaagcagccggtgctgtgtggccag
cagcaggggtcacagttgcagtgtgggagcaaaacagaggaagtggaggaggactccaat
gaacagcgggctcggcggccaatgaatgccttccttctcttctgcaaacgccaccgctcc
ctggtgcggcaggaacatccccgcttggataaccgcggggccaccaagatcctggccgac
tggtgggctgttctggagcccaaagagaagcagaaatacaccgacatggccaaggagtac
aaggatgcctttatgaaggcaaacccgggctacaagtggtgtcccgccaccagcaagcca
gtgaagagcccctctggtcccccggtcagcaacccccgcaaaaaagtttggtccttctct
tccaactcaaccaaggactcccccactgccaaaaaagtgcccaaaactgatagcatgcca
cagttgaactttgccatggcagaccctacgaagatgggaggcctaagcatgctgctgtta
gcgggggaacatgccctcacaaacagagagatcccttccagcactaaacccaggtcacct
gacgcagccagcgaagggaactcctttccaggggacaaggaagagattttgtctgggaca
gtaccaagcagagtgcctgacagtactggaggcagtgttcagtctgcccccccccaactg
gcagaaccgtctgtctctgctcctgaaggaaagccctgcccacagtctgctctgttccag
ctcgccgagatgtgcttagcctctgaagctggacagatggacccagtggggtctcagtct
gaggtctgcccctccacagccacccctctgctaactgaggtcagagcagagatcaaggag
gagagagccgactgggacgacggtcctcccccccctcagacatcacttctacctttgctc
tcctctgatgccattcccccacaatgcagcagccaaaatgcacgtgtcaaatccaagagc
acgaaaaaagagatggccaagttaaatgataatgttgagataccttccccagctaagaaa
atcctcaagaagtgtaaccatgcagagtcaaacgtggacagtgtcttcagtacaattgag
gcagtggccaaaggggtctggaaggacaccgaggagacccccaagaagaagatccaggga
agtcctagtgctggtaactcagctgtgctcaaaaagaagaataagcccaaagtcaagacc
tttgttcaagaaaaagaggaggagatggaggaaggcagcgggcagtgtgggcagacctct
tcttctgaggtagaaattaaggaagagatggccgacgtctgtcccaaacaagacgctgaa
gaagatagtttaggaagcagcatggaagaagccccgcactccccctgcagcccctcacct
tctaagcttagagaggaagacaaggggaaggagaggtcgggtgaagggaactgcgactcc
accgcagagcaccacggctccaggaaatcagagcggagctgcaaaggcgccttgtacaaa
acgctggtttctgaaggaatgctgacttcactgagagccaacatagaccgaggtaagcgc
ggtgctttacgtgcttctgatcatgatgccaactggagtgatgacagctggtcagtttct
cagacgggacctaataatcccaaaaagctgaaaaagtccaagtccaaggatgagagttct
cagggcctggggaaactggaggaggagtttgaaaggaagtttaacagcctgccacagtat
agcccaatgacatttgataagaaggggactactgtcgtaaagaagaagaagactgacagc
cccagcgtccaagaggaagtctctaaagccgggaaaggatcatctccatctcagaaaaag
acttcattccacaagattgttaggaagcaaaaactcaaaaaggagaaaccaggtgcagtg
gacaaaggggcactgagtgattccaccatgctggattcagctgcaaaagccaaatcatgt
gcccccattgccataatgtgcccggatgtccagggtgccaatagtatggagatgcttgtt
ggtagccagaagaggaaggcaagaaagaccaagatcacacacttggtgcgcacagctgat
ggcagtgtgtctcctgctgaggaggacaaaatgtgggaccagaaccaggaagaggataag
aagccattaccccaacagatgttatgcaatgacaagggttgctacagtaatcccagagca
caggaggcggagaggagcgctgcagcaccagagctgcctgctttcttcagcctggcagcc
cttgctgaggtagcagccatggaaaatgttcacagaggccagagaggcttggctgagaac
cagaagaaagagcttagccagactccagtcctcatctcctgcgccgaccagtga
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