KEGG   Trematomus bernacchii (emerald rockcod): 117472174
Entry
117472174         CDS       T09643                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagosome
tben04210  Apoptosis
tben04530  Tight junction
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117472174
  09143 Cell growth and death
   04210 Apoptosis
    117472174
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117472174
   04540 Gap junction
    117472174
  09142 Cell motility
   04814 Motor proteins
    117472174
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117472174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117472174
   03036 Chromosome and associated proteins [BR:tben03036]
    117472174
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117472174
   04147 Exosome [BR:tben04147]
    117472174
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117472174
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117472174
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117472174
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117472174
  Exosomal proteins of other body fluids (saliva and urine)
   117472174
  Exosomal proteins of colorectal cancer cells
   117472174
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 117472174
NCBI-ProteinID: XP_033973224
LinkDB
Position
Unknown
AA seq 450 aa
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSNKTIRGGDDSFNTFFSETGAGK
HVPRTVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLD
RTRKLADQCTALHGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVTDITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGDEGEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcatgtcggccaggccggagtccagatgggcaatgcctgc
tgggagctctactgcctggagcacggcatccagcctgacggtcagatgccgagtaacaag
accatcagaggaggagacgactccttcaacaccttcttcagcgagactggagccggcaaa
cacgtccccagaaccgtctttgtggacctggagcccactgtcatcgatgaagtccgtaca
ggaacctaccgccagctcttccaccccgagcagctgatcaccggaaaggaggacgcagcc
aacaactacgcccgcggtcactacaccgtcggcaaggagatcatcgacctggttcttgac
aggactcgcaaactggctgaccagtgcacagcgctccacggtttcctgatcttccactcc
tttggaggaggaaccggctctggcttcacctccctgctgatggagcgtctctctgttgac
tacggcaagaagtccaagcttgagtttgcggtttaccccgccccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgt
gcctttatggtggacaatgaggccatctacgacatctgccgcaggaacctggacatcgag
cgccccacctacaccaacctcaacaggctgattgcacagatcgtctcctccatcaccgcc
tccctgcgcttcgatggtgccttgaatgtggatctgactgagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctacgccccagttatctccgcagagaag
gcctaccacgagcagctgtcggtcactgacatcaccaacgcctgtttcgagccggccaac
cagatggtgaaatgcgacccccgccacggcaagtacatggcctgctgcctcctgtaccgt
ggtgatgtggtgcccaaagatgtcaactctgccatcgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgtcccactggcttcaaggtgggcatcaactaccagcccccc
accgtggttcctggaggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgcagaggcctgggctcgcctggaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtacgttggagaggggatggaggagggagagttctctgag
gccagagaggatatggccgccctggagaaggattatgaggaggtgggcaccgacagcgtg
ggggacgaaggagaagaaggggaggagtactaa

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