Trematomus bernacchii (emerald rockcod): 117472215
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Entry
117472215 CDS
T09643
Symbol
map1sa
Name
(RefSeq) microtubule-associated protein 1B isoform X1
KO
K10429
microtubule-associated protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117472215 (map1sa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tben01009
]
117472215 (map1sa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117472215 (map1sa)
Protein phosphatases and associated proteins [BR:
tben01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117472215 (map1sa)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117472215 (map1sa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAPB1_N
Drf_FH1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
117472215
NCBI-ProteinID:
XP_033973276
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MMAAAAVAAERGGGTGGTGAPGGPSPAGASARAEGSSPRPGSAGFSVLVVVGSLRANGLL
ERLLKQIETGVRCWPVSLDVSVLDQQLKLFVSRHSAFLSQDVPGQRTLQHHGDVLDTQVV
VNPAQDFVCSEVRRLVLDPSRHKLLVLAGQCEEASGDIVLQKGRFSFRDFLHIFTEEEVV
KVLGSADPALKAHLTLSCPDLGLWSHPALDPLQDLLTVQVNPPPVLPQMEGLQEFLEYLS
ESLEPESPFELLEPPSTVGFLKLSRPCCYVFPGGRGGSAFFAVNGFNVLVNGGSDTRSCF
WKLVRHLDRIDSVLLTHVGVDNLPGVISLLQRKVAEQEEEGAGSQTEEDWMKNLISPEIG
VVFLNAPDRLKALQVDPAEMKSCDQAALALQLLESLSIKPEPLSRSNGPSIEPLILFQKM
GVGRLELYPLNPMSKTLEVLMQNWPNGGSNAPSEELPISCLASICALLVWHPSSPQEKII
RVLFPGCTPQNRILEGLDKLKHLEFLKHPVVCLKDLESLKREKPPKRTESRESLKSQTRE
VRPSSALPKDKRVDLKKQDVKTKPKTASEAGPKDRKDGEEKPKVKEVDSKAKPPKPAEKL
VPKKEGSKEDKKDVKKKDEKVSVKKEENAEKKKETVKKETISIKPKKDLKPEPKKDGKKD
VKTEEKKPSKPASKDVKKPPSSTGSTDVKKPPSSTGSTDVKKPPSSTGSTDVKKPPLSTG
STDVKKPPSSTGSTDVKKPPSSTGSTDVKKPPSSTGSTDVKKPPSSTGSTDVKKAPGKFG
SLKKDGTLPKKDSTNKGTKGKPGSKEPEVQKEADRSKVSTPEDMTAEFENLRLENDNGNN
SQVNGNSVESPEKFRCSEPVGSDLTLEELNQDPRGCVLENSASSQDKQSSLLTLSPFRDS
STTITSMPAELGSPQSTEVDESLSVSLEQAPAEIRGNVYSNGHDSNTADHVHGMSELILD
VPHDVDLCLVSPCEFQHQHVGPSTSPDLSNNNNNNNNVSRDHSSSSTSAFSQETPPTSVS
ESLPNASDSDVPPCTDDCPSITADSEDEFPPSPLPSNRHDPPPAPVKDLPPLPPQPGACM
ADSEANKKSLVGKTRKTAGSVQRPGSGGSVTQSGRAKAVGSSTLKTTSSLDTKPSTRNIL
GGSRIGAAKPPSSAPRAAGSGGSAGSPGPAVYVDLAYLPSGAASSSVDQDLFRRLRSSYY
VISGDDPEREETTRSILEALLEGKRSWGDIQVTLIPTFDSLAMHEWYQETHERQRELSIT
VLGSNSTVAMQEETFPACKVEF
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagcagcggtagcggcggagcggggcggaggaactggaggaaccggagca
ccgggaggaccgtctcctgctggagcctctgcccgggccgaaggctcctctccccggcct
ggctctgcgggtttctcggtgctggtggtggtcgggtctctgcgggccaacgggcttctg
gagcggctgctgaagcagatagagaccggtgttcgctgctggcctgtttctctggatgtt
tctgttctggatcagcagctgaagctctttgtgtcgagacattcggccttcctgtcccag
gacgtcccaggtcagaggactctgcagcatcatggagacgttttggacacccaggttgtt
gtgaatccggctcaggacttcgtctgctccgaggtccggaggctggttctggacccgtcc
cgtcacaagctgctggttctggcgggtcagtgtgaggaggcgtccggagacatcgtgctg
cagaaaggacgcttctccttcagagacttcctgcacatcttcacagaggaagaggtggtg
aaggtgttgggttctgcagaccccgctctaaaggcccatctgaccctcagttgtccggac
ctgggtctctggtcccacccggctctggaccccctgcaggacctcctgacggtgcaggtg
aaccccccgccggtgctcccacagatggagggtctgcaggagttcctggagtacttgtcc
gaatctctggagcccgaatcgccctttgagctcctggagcctccgagcaccgttggtttc
ctgaagctttcgaggccctgctgctacgttttccccggcggacgagggggatccgcgttc
ttcgccgtgaacgggtttaacgtgctggtgaacggcggctctgacacccggtcctgcttc
tggaaactcgttcggcaccttgatcggatcgactcggtgctgctgacccacgtcggagtg
gacaacctgcccggcgtgatcagtttgctgcagaggaaggtggccgagcaagaggaagaa
ggagctggatcccagactgaagaggactggatgaagaacctcatctccccagagataggg
gtcgtcttcctgaacgcccccgacagactgaaggctttacaggtggatccggcggagatg
aagagctgcgatcaggcggcgctcgctctgcagcttttagaaagcctctcaatcaaaccc
gagcctctgagccggtctaacggacccagcatcgagccgctgatcctgttccagaagatg
ggggtgggccgtctggagctgtaccctctgaaccccatgagtaaaaccctggaagtcctg
atgcagaactggccgaacggcgggtcgaatgcaccgtctgaagaacttccgataagttgc
ctcgcctcaatctgcgctctgttggtctggcacccatcgagtcctcaggagaagatcatc
agggtccttttcccgggctgcaccccgcagaaccggatcctggagggacttgataaactc
aaacatctggaattcctcaaacatcccgtcgtgtgtttgaaggacctagaaagtctgaaa
agggagaaaccaccaaagcgaacggagagtcgggagagtctgaagtcccagacccgggag
gtccgacccagcagtgccttaccgaaagacaagagagtggatctcaagaaacaggacgtg
aagacgaagccgaagacagcaagtgaagccggaccgaaagacaggaaggatggggaggag
aagccaaaagtaaaggaggtagactctaaagcaaaacctccgaaacctgctgagaagctg
gttccaaagaaagaggggtcaaaggaagacaagaaggacgtgaagaagaaggacgagaag
gtgtctgtgaagaaagaagagaacgcagagaagaagaaagaaaccgtgaagaaggaaacg
ataagtattaaaccaaagaaagatctcaagccggaaccaaaaaaagatggcaagaaggac
gtgaagacggaggagaagaaaccatcaaaaccagcttctaaagacgtgaagaaaccacca
tcgtccacaggaagtaccgacgtgaagaaaccaccatcgtccacaggaagtacagacgtg
aagaagccaccctcgtccacaggaagtaccgacgtgaagaaaccaccattgtccacagga
agtaccgacgtgaagaaaccaccatcgtccacaggaagtaccgacgtgaagaaaccacca
tcgtccacaggaagtaccgacgtgaagaaaccaccatcgtccacaggaagtaccgacgtg
aagaaaccaccatcgtccacaggaagtaccgacgtgaagaaagcaccgggcaagtttggc
tctctcaagaaagacgggaccctcccaaagaaagactcgacgaataaagggaccaaaggt
aaaccaggctcaaaggaaccagaagtccagaaggaggcggatcgctcgaaggtctcgaca
cccgaggacatgacggccgagtttgagaatcttcggctggaaaacgacaacgggaacaac
tcgcaggtcaacgggaactctgtggagagtccggagaagtttcgctgctcagaacctgta
ggatccgatctgaccctcgaggagttgaaccaggaccctcgaggatgtgttctggagaac
tctgcgtcctctcaggataaacagtccagcctcctgacgctcagtcctttcagagactcg
tccaccaccatcacctccatgccggcagaactgggatcccctcagtccacagaggtagat
gaatccctgtcggtgtctctggagcaagcccccgctgagatccggggaaacgtctactct
aacggacacgactccaacaccgcggaccacgtccacggcatgtcggagctgattttagac
gtgcctcacgacgttgacttgtgcctggtgtcaccctgtgagttccagcaccaacatgtg
ggtccctcaacgtctccagacctctccaacaacaacaacaacaacaacaacgtctctcgg
gatcacagcagcagcagcacgtcagcgttcagccaagaaaccccgcccacttctgtgagc
gaatccctcccaaacgcctcggattcagacgtccctccgtgtaccgacgactgcccgtcc
atcacagctgattctgaagatgaattccctccaagtcctcttccctcaaatcgtcacgac
cctcctccagcccccgtcaaagatctacccccgttgcccccgcagcctggagcatgcatg
gccgattcggaggcgaacaagaagagtttggtgggtaaaaccaggaagacggcaggatct
gtgcagaggccgggatctggaggaagcgtgacgcagagcgggagggcgaaggcggtcgga
tcgtcgacgctgaagaccacaagcagtctggataccaagccgtcaacaaggaacattctg
ggaggatccaggataggagcggcgaaacccccgtcctcagctcccagagctgctggttct
ggaggttctgctggttctccgggtccagcggtctacgtggatctggcctacctgccgtcc
ggcgccgcctcctcctccgtggatcaggatctgttccgacgcctccgatcctcgtactac
gtgatcagtggagacgacccggagagagaggagaccaccaggagcatcctggaggctctg
ctggaggggaagaggagctggggggatatacaggtgaccctgatcccgacctttgattcg
ctggcgatgcacgagtggtaccaggagacccacgagcggcagagggagctgagcatcacc
gtgttgggcagcaacagcacggtcgccatgcaggaggagaccttccccgcctgcaaggtc
gagttctga
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integrated database retrieval system
