Trematomus bernacchii (emerald rockcod): 117472339
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Entry
117472339 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117472339
Membrane trafficking [BR:
tben04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117472339
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
117472339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117472339
NCBI-ProteinID:
XP_033973375
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MNPQETELGQEVMEEADAPPRHRHNNHNSRSRNHSNQEKRYRRVEAPAGGGAGSRVRGPQ
QHRGPQEETEEPPQPQPIPRPAVTRYRRQGDSEARVRAQQQRHRQRQQREAERTQHLAQH
EKQRRAQRSQEDERERDDSALARSASTESNFHTHTDRAEGDDGLLVMSLELEGQAEAEDD
AGNYEVQLRPEAEGYTESAEAEQQHLHPHSPPQPPEPLPEVESPQRQGEAEEMLHAGYSN
YVYTQPLSPSSGRGDVSDGQSLESLDAALGDEAYSEPYDIYSLSEHVYEEICDTPTSVSS
AADGAEDTESLLQRRAGFKLFEGRAAGGDYHQQEAVGSRLRHYDERSDGESDSPEKEAEF
APYPRADSCDQDEDIDTIVAEVKESLSSQSLHRALEDTIDEENELLEGEEKAQDESQIDS
DKNHQAANTGTDMTQCVSPSEEPVAVRNSQDKRDAISLAIKDIKEAIEEVKTRTVRSPYT
PDEPKEPIWVMRQDLSPTAECDLQPSLGGDSPGSDSPSPPGAESSSRLLLQDDGFQSSPS
SKETKRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNIRMMQAQEA
VSRIKTAQKLAQNKKKAPEGEPQPMTEVDLFISTQRIKVLNADSQETMMDHPLRTISYIA
DIGNIVVLMARRRMPRPDSQENVEASDPGQESKRQYKMICHVFESEDAQLIAQSIGQSFS
VAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDVFVEKAKGEILGV
VIVESGWGSILPTVIIANMMHAGPAERSGKLNIGDQIMSLNGTSLVGLPLSTCQSIIKGL
KNQSGIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRII
EINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccaggagacggagctcggccaggaggttatggaggaggccgacgcccccccc
cgccaccgccacaacaaccacaacagccggtcccgtaaccacagcaaccaggaaaaacgc
tacaggcgcgttgaggcccctgcaggaggaggtgctgggagcagagtgagggggcctcag
cagcacagggggccacaggaggagacagaggagcctccacagccccagcccatcccccga
cccgcagtgacacggtaccgcagacagggggacagcgaggcccgggtcagagcccagcag
cagaggcaccggcagaggcagcagagggaggcggagcgaacgcaacacctggcccagcac
gagaagcagcggcgcgcccagaggagccaggaggacgagcgggagcgagacgattcagcg
ctggcccgctcagccagcaccgagagcaacttccacacccacacagaccgggccgagggc
gacgacggcctgctggtgatgtctctggagctggaggggcaggcagaggccgaggacgac
gccgggaactacgaggtccagctgaggcctgaggcggaggggtacactgagagtgccgag
gctgagcagcaacatctccatcctcattccccccctcagccacctgaacccctgcctgag
gtcgaaagcccccagagacagggtgaagccgaggagatgctgcacgccggctactccaac
tacgtctacacccagcccctcagcccctccagtgggaggggcgacgtgtcggacggtcag
agcctggagagtttggacgctgctctcggggacgaagcctactccgagccatatgacata
tactcactctcagagcatgtttacgaggagatctgcgatactcccacatcagtttcatct
gctgcggacggggcagaggacacagagtcgctcctgcagaggcgtgccggcttcaaactg
ttcgagggtcgggcggcagggggagactaccatcagcaggaagcggtgggctcccgtctg
cggcactacgacgaacgctcggacggcgagtcagacagcccggagaaggaggccgagttc
gccccgtacccgcgcgccgacagctgcgaccaggacgaggacatcgacaccatcgtggct
gaggtgaaagaaagcctgagctctcagagtcttcatcgtgctcttgaagacaccatagat
gaagaaaatgagctactggaaggagaggaaaaagcccaagatgagtctcagatcgactct
gacaaaaaccaccaagctgccaacacagggacagacatgactcagtgtgtaagtccttca
gaggagccggtcgcagtgaggaacagccaggacaagagggacgccatctccctggcaatc
aaggacattaaggaggcaatagaggaggtgaagaccaggaccgtgagatccccgtacact
cctgacgagcccaaggagccgatttgggtcatgaggcaggacctgagccccactgcagag
tgcgacctgcagccctcactggggggggactctccaggctcagactcgccctctcctcca
ggagcagagtcctccagcagactcctgctgcaggacgacggcttccaatcttctccctcc
agtaaagagaccaagagaagccttgcatctttccccacatatgtggaagtcccaggccca
tgtgacccagaggacctgatcgatgggatcatcttcgcagccaactacctgggctccacc
cagctgctgtcagataagacaccgtccaagaacatccgcatgatgcaggcacaggaggcg
gtcagccgcatcaagacggcccagaaattagcccagaacaagaagaaggcccctgaggga
gagcctcagcccatgacggaggtggatctctttatttctacccagagaatcaaagtgctc
aacgctgactctcaggagaccatgatggaccaccctttgaggaccatctcctacattgct
gacattggtaacatcgtggttctgatggctcggcgcaggatgcctcgacccgactctcag
gagaacgtggaggcctcagatccagggcaagagagcaagcggcagtacaagatgatatgc
catgtgtttgagtccgaggatgcccagctgatcgcccagtccattgggcagtccttcagt
gtggcttaccaggaattcttacgggcaaatggtattaacccggaggacctgagccagaag
gagtacagcgatctgctcaacactcaggacatgtacaatgatgacctcatccacttctct
aagtctgagaactgcaaagacgtgttcgtagagaaagcaaagggggagattctgggtgtg
gtcattgtggagagtgggtggggctccatcctgcccaccgtcatcatcgccaacatgatg
catgctgggccggctgagaggtctggcaaactgaacataggagaccagatcatgtccctt
aatgggaccagtctggtgggactgccactgtccacctgccagagcatcatcaagggtctg
aaaaaccagtctgggatcaagctgaacatcgtcagatgtcccccagtgaccactgtgctc
atcagacggccagacctgcgctaccagctggggttcagcgtccagaacggcattatctgt
agccttatgcgtgggggcatcgctgaaaggggcggggtcagagtgggacaccgcatcatc
gagatcaacagccagagcgtggtggccacgccccatgagaagatcgtccacatcctgtcc
aacgctgtgggagagatccacatgaagacaatgcctgcagccatgtaccgcctgctgacc
gcccaggagcagcctgtttacatctaa
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integrated database retrieval system
