Trematomus bernacchii (emerald rockcod): 117472354 Help Entry 117472354         CDS       T09643                                  Symbol atxn2 Name (RefSeq) LOW QUALITY PROTEIN: ataxin-2   KO K23625   ataxin 2/2L Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tben03019]     117472354 (atxn2) Messenger RNA biogenesis [BR:tben03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      117472354 (atxn2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SM-ATX LsmAD PAM2 Motif Other DBs NCBI-GeneID:  117472354 NCBI-ProteinID:  XP_033973390 LinkDB All DBs Position Unknown AA seq 1118 aa AA seqDB search MSMKAGGNRSKPGGGNTAGAAAAGTGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV HVLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSPEPSIAPRKEDIVESII FKASDVVVVTFKDVDLNFARKDNFTDAAVSGKINGEHKEKDLEPWDGGETHNSDSLESLD TDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDNSEEFLKREARAAQLAEEIE GSATYKARVALENDERSEEEKYTAVMRGDRETHTLSRENKYIPPGQRSRETMSWGPGRQN PSRLAQSSAGPSAPRAGPHDYSPSAGADQRVVNGGSSHWHSPCPSPSSRPPPRYQSGPSS LPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRMSSEGPP RMSPKSQRTPRSHRAPPCRTTGGDFISHNAPGEVPVTPPTRSSSSGGTWSSVVSGAHRPR SPRQNNMGGASSGSSSLPAAQTGAAPVETVSTATSASSPNAASPAPNMVTSSSADAKECR VQETRQTSPTANKENIKPLDSSPSVTRPVCKGPPSMAPDHRKQIDNLKKFSVDFRLQSSS NSDPAFDPMMTKPPRDPADKPKDLPMDKASSVGREGPEDGVAGGAPAPSTTNASKPGSPA ALSPSPSAPDQKRAGLDVASQGVQTNATSSFSGAKHEEKEEKKEAVHDQVRKSTLNPNAH EFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQQPPAVYGQTVCFPQMYPLTPVSPGVQKS IIWKAPAMYQVQMPHMTVGQSKPYRPGKVPNMPQQRSEQHHPQGTATMMHPATAAGPPIV AQSPAYSAQYFTCSPQQFTNQPLVQQMTHYQSQAQHVFSPVMQGSARMMAPPTHGQPTLV SSSTTQYPEQTHTMYVSPGPMPQQYPHPNATLHPHQQHPQPSATPTGQGQQGGPQQHGVP QNHPAASPVQHSQHQQAAAAAAAAQALHLANQPQQQQMYSALAPTPPSMTPGPNPQSPQA SFPSAQQTVYIHPQQVQHGYNHNHMAHVQQAHMQSGLVQSHHPGQTHPTMMLMATQGPPG GPQQAMPQNALNPIPVSSTTHFSYLAHPQVQAHHQQQL NT seq 3357 nt NT seq  +upstreamnt  +downstreamnt atgtcaatgaaggccggtggaaatcgcagcaagcccggcggtggcaacacggctggagcc gccgccgccggtaccggaggaagcggagggggaagacagaatctgggcagggggagacac agtggtaaaggccctgcagcggtcattttcaatggtgtatatgcaaacatgaggatggtc catgtcttgacttcagtggtgggcaccaagtgtgagctgaaagtaaaaaatggagcagtt tacgaaggagtatttaaaacatacggtccagagtgtgacctggtgctagatgcagcccac agaaagagcccagagccgagcatagctcccaggaaagaggatattgtggagagcattata ttcaaggcctcagatgtcgtagtggtgaccttcaaagatgtggacctgaattttgccagg aaagacaacttcacagatgctgcagtgagcggtaagatcaatggcgagcataaagagaag gatctagagccctgggatggaggagagacccacaactctgacagcctggagtctctggac accgatgtctcaaatgggtgggaccccaatgacatgtttaaatacaacgaggagaagtat ggagtgttgtctacatatgacagcagcctgtccacatacacggtccccctggagagggac aactcagaagagttcctcaagagggaggcgcgtgctgcccagctggccgaggagattgag ggcagcgccacatacaaggcccgcgtggccttagagaacgatgagcgctctgaggaggag aagtatactgctgtgatgagaggggatcgggagacccacacactgagcagagagaacaag tacattcctccgggtcagaggagcagggagacgatgtcctggggcccgggacgtcagaac ccatctcgcctggctcagagctcagcgggcccctcggctcctcgagcaggacctcacgac tacagtcccagcgccggggctgaccagagagtggttaacggaggttcatcccattggcac tcaccctgtccgtctccttcctcccgccccccccctcgttaccagtctggcccctcctcc ctgcctcctagggcgaccacgcccaccaggccaccctccagacccccctctcgaccttcc aggcctccctctcattcatcccacccctcctatccctcctcctcatcctccttttcccac catgggcctacgtcaccagcctccactctgcccaaacgcatgtcttcagaaggcccaccc aggatgtctcctaaatcccagcggacgcctcgttctcacagagcgccaccctgtaggacc accggaggggatttcatttcccacaatgctcctggagaggtcccagtgactccaccaacc aggagcagctcctctggagggacatggtcctctgtggttagcggagctcacagacctcgc tccccccgacagaataatatgggtggagcctcttctggctcctcctccctcccagcagcc cagacaggagctgctcctgtggaaaccgtttctacagcaacatcagcttcctctcctaat gctgctagccccgcccccaacatggtcacctcttcttcggcagatgcaaaagagtgtcgc gtccaagagacaagacagacatcccccacggctaacaaggagaacatcaagcccttggac agctcacctagtgtcaccagaccagtctgtaaaggacccccttctatggcaccagaccac agaaaacaaatagataatttaaagaaattcagtgtagattttaggttgcagtctagttca aactcagaccctgcctttgacccaatgatgaccaagccccccagagatccagcagacaag ccgaaagatcttcccatggacaaagcctcctcagtggggcgggagggccctgaagacggt gtggctggtggagcacctgctccatccaccacaaacgccagtaagcctggcagccctgct gctctgtccccgtccccctcagcccctgaccagaagagggcggggcttgatgtggcatca cagggagtccagaccaacgccacgtcctcattcagcggagccaagcatgaagagaaggag gagaaaaaggaggccgtacacgatcaagtgagaaaatcaactctgaacccgaatgcccat gagttcaaacccaggtttaacacgcagcccaaaccagccaacaccccgacgcccccccgg cctcagggccagcccagcccctccatcgtggtgcagcagccccccgctgtctacggacag acagtgtgcttcccccagatgtatcctctcacaccagtcagccccggagtgcagaaaagc ataatatggaaggctccagctatgtaccaggtccagatgcctcacatgacagtcggccag tctaaaccctacagaccaggtaaagtacccaacatgccccagcagaggtcagagcagcac cacccccaaggcacggccaccatgatgcacccagccaccgcagcgggaccccctattgta gcacagagccccgcctactctgcccagtacttcacctgcagcccgcagcagttcaccaat cagcctctggtgcagcagatgacacattaccaatcacaggctcagcatgtgttcagtcct gtcatgcagggcagtgccaggatgatggccccccccacacacggccagcccaccctggtg tcctcctccaccacacagtacccagagcagacacacaccatgtatgtgtctccagggcca atgcctcagcagtacccccaccccaacgccactttgcaccctcaccaacagcacccccag ccctctgccacgcctacaggccagggccagcagggcgggccccaacaacacggagtccct cagaaccaccccgctgccagcccagtgcagcactcccagcaccagcaggcggccgcagcg gcagcagcagcccaggccctccacctggccaaccagccccagcagcagcagatgtactct gccttggcccccactcccccctccatgaccccggggcccaacccacagtccccccaggcc tcgttcccctctgcccagcagacggtctacatccacccccagcaggtgcagcacggatac aaccacaaccacatggcccacgtacagcaggcccatatgcagtctggtttggtgcagtcc caccacccggggcagacccaccccaccatgatgctgatggctacccagggtcctccgggg gggccgcagcaagccatgccccagaatgccctcaaccccatccctgtctcctccaccaca cacttctcctacctggcgcatccacaagtgcaagctcaccatcagcagcagctgtag

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