Trematomus bernacchii (emerald rockcod): 117472411
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Entry
117472411 CDS
T09643
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117472411 (gapvd1)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117472411 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
117472411
NCBI-ProteinID:
XP_033973461
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRTAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQENIYGEFLARLRENPRLVASCLVAGERL
NQEHNQCVTHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFTEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQSAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMTDNDADPR
RKSSLAKFDKSCVAAFLDVVLGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLVLVDFVR
NVMAGDHLREEEHMALETLVANVPQSRAVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTTLSAHIPLVTPFAARSRSRTNIAQEGEAEASSQESLQELMPEDVLV
ISLGNGPQSVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGIS
EGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIR
DMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSGS
VLLDPYGSTISETTSEAWSVEVLPSDSGRDPEAPDLKQEERLQELESCSGVGSTSDDTEV
REVSSRPSTPGLSVVSGVSATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGAHP
TSPPSQADSLLAMFDPLSSADGSTTGTIVRPKVHYARPPHPPPDPPIPEASALGPETRHS
LFTPHCLAQVELDHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGA
FALGPSSSPSKDSLKGEVDDRKDSDDEKSDRNRPWWKKRFVSAIPKAPIAAFRKRDKQEK
DDVPPERVPQADDLLPRQSSQAQAAEDILDKYRNIKRISPSDGATGGASYDGTGDLCGDD
NVHDSPREDTLQNISTDDLPDSASQTAQQHDTKFSFSDAKKKLRLALCSADSVALPIMLP
VTTRNGLPDHMESEDNEIVCFLKIQLAEAINLQDKNQMAQIQETTRCVSRFDARTSRKLM
AAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEH
MESKMLDFIKAFQGCTASDDKTASVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERS
VMNRIFKLAFYPNQDGDILRDQLFHEHIQRLTKVVTANHKALQIPEVYLKEAPWPSAQSE
IRTINAYKTPRDKVQCVLRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLS
TVQYINNFYASRLSGEECYWWMQFTAALEFIKTIDDRK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcgtcggagaagcagctgatccagaggctcaacagtgacgtgctgaagaccgccgagagg
ctgtaccggactgcatggatcgccaagcagcagaggatcaacctcgatcgcctcattctc
acaagtgcggaggcctctccagcggaatgctgccaacatgccaaaatgctggaagacaca
cagtttgttgatggctacaagactctgggcttccaagagaacatctatggagagttcttg
gcccggttgagggaaaaccccagactggtggcttcctgtctggtggccggggagaggctg
aaccaggagcacaaccagtgtgtcacccatacagtcttcacctcactttatggcaactgt
attatgcaggaggatgagagctacctgctacaggtgttgcgttacctggtggagtttgag
ctgaaggaaagtgacaaccctcgccgtttgctgcgacggggaacctgtgccttcagcatc
cttttcaagctcttcaccgagggcctgtactccgccaaactcttcctcaccgccacccta
catgaacccattatgcagctgctggtggaagatgaagaccacctggagaccgacccagcc
aaggtgacggagcgcctcacccctgcccagcaggagcgcttcggagagaagggctccgag
ggctacaaacaaagggtgcagtcagcggtggaggccaacgaagctaagctagtagctctg
gtcaacaagtttatcggttacttaaagcagaacacctactgctttccccacagcctgcgc
tggattgtgtcgcagatgtacaagactttgtcctgtgtggagcgtctggaggtgggcgag
gtgcgcaccatgtgcaccgacctgctgctgacctgcttcatctgcccagctatagtcaac
ccggagcagtatggaatcatctcagacgcccccatcaatgaagtagctcgcttcaatcta
atgcaggtgggtcagcttttgcagcagttggccatgactgataatgatgcagacccaagg
cggaaaagcagtttggccaaatttgataagagttgtgtggctgcttttctggatgtggtc
cttggaggaagagcagtcgagaccccacccatgtcctcaatgaacctcctagaaggcctc
agtaggactgcggtctatattacacataatcagctgcttgtgctggtggactttgtacgg
aatgtgatggcaggggaccaccttcgggaggaggagcacatggctctggagactctggta
gccaatgtgccccagtcccgagctgtgaagagcaacagtctggagctcactccctccaac
accccccagctctcccccgctaccactcctgccaacaagaagaacaggctccccatagga
caacacttagccgctataacatcctgggaccccacaaccaccactttgtctgctcacatt
ccattagttaccccttttgctgctcgcagccgcagccgtaccaacatagcccaggagggg
gaggcagaggccagctcccaggagtccctgcaggagctgatgccagaggatgtgctggtg
atttcacttggaaatggtcctcagtcggtccctgggatgatgtcagagaatgaggttttg
aacctgcagatggctgatggggcccagggggacggccatgctgatgataccaagctgcat
ggtaaaccagacaaaactctgcgcttttccctctgcagtgacaacctggaaggcatctca
gagggtccatctaacagatctaactctgtgtcctctctggacctggagggagagtctgtc
tctgaactgggagccggaccatcagggagcaacggggtggaggcgctacagcttctagag
catgaacaggccaccactcaagacaacctggatgacaaactgcgcaagtttgagatcaga
gacatgatgggtctcaccgatgatcgggacatctctgagacggtcagcgaaacctggagc
accgatgtgctcggcagcgactttgaccccaacatggatgaagatcggctgcaggaaata
gcaggggccgctgcagagaacatgctcggcagcctgctgtgtctccctggctccggatca
gtgctgctggacccctatggctccaccatctcagagaccaccagcgaggcctggagcgtg
gaggtcctccccagtgactcaggtagggatccagaagctcccgacctgaaacaggaggag
cgtctgcaggagctggagagctgctcaggggtcggcagtacctccgatgacacggaggtc
agagaggtcagctcgaggcccagcacaccaggcctcagtgttgtctcaggcgtcagtgca
acctcagaagacatccccaacaagatcgaggacctgcggtcagagtgcagctcagacttc
ggagggaaggactctgtgaccagtccagatggggaggagtcaggccacggagcacatccg
acatctccaccctcacaggccgattccttactggccatgttcgatcccctctcctccgct
gacggctccaccactggaacaatagtgaggcccaaagtgcactacgccaggccccctcac
cctccccccgaccctcccatccctgaagccagtgccctggggccggagacgcgccactct
ctcttcacgccccactgcctggcccaggtcgagctggatcacaccaagcagcggcactcc
ttccccgacaggctggtacgtagccgcagctctgacatcgtgtgcccaggccgccggccc
acaagcgaccccggccttaaccggcgggttgcggttgaagagcgcgaccctgccggggcc
ttcgccttaggaccgtcctcgtcccccagcaaggactccctgaaaggggaggttgacgac
cgtaaagacagcgacgacgagaagtcggaccgcaacaggccatggtggaagaaacgtttt
gtgtcagccattcccaaagctccgatagctgcctttcggaaaagggacaagcaggagaag
gacgacgtgcccccagagcgcgtcccacaagcggatgacctgttgcccagacagagctct
caggcgcaagcagctgaagatatcctggacaaatacaggaacatcaagaggatcagcccg
agcgatggcgccacaggtggagcttcttacgatggaacaggagatctttgtggtgatgac
aacgtccacgactctccgagagaagacactctgcagaacatttccacagacgacctccca
gactcagccagtcagacagcccagcagcatgacaccaagttctctttcagtgatgcgaag
aagaagttgaggttggctttgtgttcagcggactcagtggctctgcccatcatgcttcct
gtgaccacacgaaacgggctgcctgaccacatggaatctgaagacaatgagatcgtctgc
ttcctgaagatccagctcgcagaggccatcaaccttcaggataagaaccagatggcccag
atccaggagaccacgcgctgcgtcagccgctttgacgcacgcaccagcaggaagctgatg
gctgccatcgcggaggattacagaaagcgggcaccatacatagcgtatctaacccggtgt
cgccagggcctgcagacctctcaggcccacctggagagactcctccagagggtgctgaga
gacaaggaggtggctaaccgctacttcaccacagtctgcgttcgcctccttctcgaacac
atggagtccaagatgcttgacttcattaaagcgttccaggggtgcacagcatcggatgac
aagaccgcatcagtggaggattttctgcgctacttgtacggcgccatggcccgtgatgcc
atttggcagtacgcgagcgaggaccagctgcaggatgcccagatggctatcgagcgcagc
gttatgaaccgcatcttcaaattggccttctaccccaaccaggatggagatattctcaga
gaccagcttttccatgaacatatccagcggctcacaaaagttgtgacggccaatcataaa
gctctgcaaatcccagaggtgtacctgaaggaggctccctggccctccgcccagtctgag
atcaggaccatcaatgcatacaagacgcctcgagacaaagtccagtgtgtactgcgcatg
tgttccaccatcatgaacctcctcagtctggccaacgaggactcagtccccggagccgat
gactttgtccctgtgctcgtctttgtcctcataagggcaaacccgccctgcctgctgtcc
accgttcagtacatcaataatttctatgccagccggctgagtggggaggagtgctattgg
tggatgcagttcaccgcggcgctggaattcattaagaccatcgatgatcgcaagtga
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integrated database retrieval system
