Trematomus bernacchii (emerald rockcod): 117472505
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Entry
117472505 CDS
T09643
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117472505 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117472505 (dtx1)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117472505 (dtx1)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117472505 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_Vps41
zf-UDP
zf-RING_2
zf_RING_Vps8
zf-ANAPC11
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
117472505
NCBI-ProteinID:
XP_033973624
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MARPGSGLLVPVNGLGYPPQNLARVVVWEWMNEHGRWRPYSAVVCHHVENVLKGDARGTV
VLGQVDAQLTAYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMCQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGANSGQPCSCQQCILVNSTRAASNAILASQRRKHYGVTTGNTGATGTL
TAVRQSNTFAGTSLWSPTSASSGPNNNNISMGGGHAKAEQVLLPLSSANFPCSPVMPTLS
SAHGHHALTINGQNNLNRPGTQRISISTARGAVPPGVPALPVKNLTGTGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLRKGKNPEDVVRR
YTEKIKVVPDEDCTICMERLVMASGYEGILHHKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPHCLPGYPDSKSIRIVYDIPAGIQTN
EHPSPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDHKYLDNVLTELSAQGVGEGNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtccaggatcagggctgctggtacctgtcaatggtctgggataccctcctcag
aaccttgccagggtggtggtctgggagtggatgaacgaacatggccgctggaggccctac
agtgccgtggtttgccaccatgttgagaatgtactgaagggggatgctcggggaactgta
gtcctggggcaggtggatgcccagctcactgcctacatcatcgacctgcagtccatgcac
cagtttcgacaagacacgggcacgatgagaccagtgcagagaaacttctatgagccgtcg
tccgccccggggaaaggcgtggtgtgggagtgggagaacgacagcggctcgtggacgccg
tatgacatggagatctgtgtgaccatccagaatgcctacgagaagcagcacccctggctt
gacctcacctctctgggcttctgctatctcatcgacttcaacagcatgtgtcagaccaac
aggcagagtcagcgtaagagacgcctgcggagacgcatggacctggcctacccgctcatc
atgggctccatccccaagtcccagtcatggcccgtgggagcaaactccggccagccctgc
tcctgccagcagtgcatcctggtcaacagcacgagagccgcctccaatgcaattctggcc
tctcaacggcgtaagcactacggcgtgacaacaggaaacacaggcgctacaggaactctc
actgcagtgcggcagagcaacacctttgctggaacctccctctggtccccgacatccgcc
tcctcgggccccaacaacaataacataagtatgggaggtgggcatgccaaagctgaacag
gtgctgttgccactgtcctctgccaacttcccctgttcccccgtgatgcccactctttca
tccgcccatggccaccacgctctcaccatcaacggacagaacaacctgaaccggccgggc
acacagcgcatttccatcagcactgccagaggagccgtcccaccaggggttcctgctctc
ccagtaaaaaacctgactggaactggaccagtgcacccagccctagcaggtatgacaggt
atcctgatgtgcgctgcaggtctgccggtttgcctgacccgggcccccaagcccattctg
cacccgccccccatcaataagagcgacatgaagcctgttccagggatcaatggcatgcgc
cgcaaaaccaagaaaaagcacctgaggaaaggcaaaaacccagaggatgtggtgcgaaga
tacacagagaagattaaagtggtgccagatgaggactgtaccatctgcatggagaggctg
gtcatggcgtcaggctatgaaggcatcctgcatcacaaaggcatcaagccagagctggtg
ggcaaacttggcaagtgtggccacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggatggcagtcttcaatgcccaacatgtaaaaccatctatggggagaaa
acgggcacccagcctcctgggaagatggagtatcacgtcatcccccactgcctgcccggc
tacccagactccaagagcatccgcatcgtctacgacattcctgctgggatccagaccaat
gagcaccccagccccgggaaaaaattcagtgccagagggtttcctcgacactgctacctc
cctgacaatgacaaaggcaggaaggtcctgaagctgctgatcatggcctgggaccgacgc
ctcatcttcaccatcggcacgtccagcaccacgggagagtcggacacggtggtgtggaac
gagattcaccacaagacagaatttggctccaacctgactggtcacggctacccggaccac
aaatacctggacaacgtcctgacagagctgtcggcccagggggtcggcgagggcaacctg
aaggactga
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