Trematomus bernacchii (emerald rockcod): 117472507
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Entry
117472507 CDS
T09643
Symbol
rnf34a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34a isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117472507 (rnf34a)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117472507 (rnf34a)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117472507 (rnf34a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117472507
NCBI-ProteinID:
XP_033973630
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MSSSSPTHSGWTSADCPWRAVKQSGCAQAAQLTQKKQPGPGLEHFSHHTKTNSCNLRSDA
SYCNVFTACLLFHGRNAGAAMKAGASSMWASCCGLLNEVMGTGAVRGQQPGFGAGAGPFR
FAPSAGYSTYPPASSGSPSLVCKACGQAFSVFRRKYICCDCKRSFCSLCSVLQENLRVCT
TCHLLKATAFQRPRLMRLRVRDLRQYLLLRNVPTDTCREKQDLVDLVLCHRGIEEEEDPD
AASLHSRSLYTPTPSTTQSASELSAFVASQEEPLSRSDSSDTNQDIGDATSVSLLNLDPS
EHTPEVSPQTRRRARASLSDISSLRDIEGLSVRQLKEILARNFVNFSGCCEKWELVERVN
RLYRETEENRKSLEHVSSTETTVVAFPPPICNGAVGDGEKGPLTVQDDNLCRICMDAVID
CVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFKS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatcatctccgacacattctggctggacttctgcagactgtccatggagggca
gtgaaacagagtggttgcgcgcaggctgcacagctcacacagaaaaagcagcctggcccg
gggctcgaacatttctctcatcacaccaagacgaattcatgcaatttaagaagtgatgcc
tcatattgcaatgttttcaccgcctgcctcctcttccacggtagaaacgccggagctgca
atgaaggcaggggcctcgtccatgtgggcttcatgctgtggtttgctgaatgaagtcatg
ggtacaggggccgtcagaggccagcagccagggtttggggccggtgctggacccttcaga
tttgcccccagtgcgggatactccacatacccgcccgccagctcaggaagtcccagtctg
gtctgcaaggcctgtggtcaggccttctcagtcttcaggaggaagtatatttgctgcgac
tgcaagaggagcttctgctctctgtgctccgtgcttcaggagaatctgcgtgtctgtacc
acatgtcatttgctgaaggcgacagcgtttcagcgtccgcggctcatgcgcctacgagtc
agggacctgcgtcagtacttgctgctccgtaacgtccccacggatacctgcagggaaaaa
caagacctggtggacttggtgctttgtcaccgaggcattgaggaagaggaggacccagac
gcggccagcctccactcgcgttccctctacacgccgaccccttccaccacgcagtcagcc
tcagagctgtcggccttcgtcgcctctcaggaggagccgctcagcaggagtgacagctct
gacaccaaccaggatataggtgatgccacatctgtgtctctcctcaacttggaccccagt
gaacacactccggaggtcagtcctcagacgcggcgtcgggccagagcgtcgctctcagat
atctccagcctgagggacatcgagggtctgtccgtccggcagctgaaggagatcctcgcc
aggaactttgtcaacttctcagggtgctgtgagaagtgggagctggtggagcgggtcaac
cgactgtacagagagacggaggagaacaggaaatcattggaacatgtgagcagtacagaa
accacagtggtggcctttccccctcctatctgcaacggggccgtcggagacggtgagaag
ggtccgctgacggtccaggatgacaacctctgcaggatctgcatggacgctgtgatcgac
tgcgtcctcctggagtgcggtcacatggtcacctgcaccaagtgcggcaagaggatgaac
gagtgcccgatctgcaggcagtacgtcgtgagggccgtgcacgtcttcaagtcctaa
DBGET
integrated database retrieval system
