Trematomus bernacchii (emerald rockcod): 117472587
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Entry
117472587 CDS
T09643
Symbol
scarb2a
Name
(RefSeq) lysosome membrane protein 2a isoform X1
KO
K12384
lysosome membrane protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117472587 (scarb2a)
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Motif
Pfam:
CD36
DUF7657
TMEM51
Orthoreo_P10
DUF4245
DUF6097
Motif
Other DBs
NCBI-GeneID:
117472587
NCBI-ProteinID:
XP_033973762
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MTRRSCAIYATGIVCAHLLIVGIALVVAQVFQTMIHSRLKKEITLTEKSQMFESWKNPPP
PVYMEYYFFNVTNPEVFLAGGKASLKQIGPYTYREYRPRENITFLENGTKLFALNPKTFV
FVPEKSAGNPEVDLIRTVNIPFVAIMNELNSYSFFLRTVVSMYLNSMGVEVFMTRTVHEV
LWGFKDPVLTKVKSLKPEVDEYFGLMWKKNGTHEGEFVFHTGEQNYMDYGKIDTWNGLRE
MSWWSSNSSNMINGTDGAVFHPLINRNELLYIFAADLCRSIHLAYVKDVEVKGIQAYRFA
PPNDVLMNPKENPANAGFCVPAGDCLGTGVLKVSVCREGAPIVVSFPHFYQADPKYINAV
EGLNPNKEEHETYLDLQPTSGVPIRACKRAQLNIILKRVTGFPKTKLIHETIFPIMFVNE
TATIDDDSASQMRTLLLIVTLVSNFPLLIVGMGIILLLVLVVLFCRNRQKKNEVKRIDFT
EAFHSFATVKDDTAYTQVSDKPDEPSEMPANQPMKNGSYIAMSPVEAQKC
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgactcggagatcctgtgccatttacgccaccggtatcgtgtgcgctcacctcctgata
gtgggaatcgccctggtcgtggctcaagtcttccaaacaatgatacacagccgtttaaaa
aaggaaataactttgacagagaagagtcaaatgtttgagtcatggaagaatccccctcca
cccgtttacatggagtattacttcttcaatgtcaccaatcctgaggtgttcttggcaggc
ggaaaggcatctttaaaacagatcggaccgtatacttacagggagtacaggccgcgggag
aacatcactttcctggagaacgggaccaagctctttgcactgaatcccaaaacctttgtg
tttgttcctgagaagtcagctggtaaccctgaggtcgaccttatcaggactgtcaacatc
ccgtttgtggccatcatgaacgagctgaactcctactccttcttcctgcgaactgtggtt
tccatgtacttgaacagcatgggcgttgaggtgttcatgacccgcactgtccacgaggtt
ctgtggggcttcaaagaccctgtcctcacaaaggtcaagtccctcaagccagaagtggac
gagtattttgggctgatgtggaagaaaaatggcacccatgaaggagagtttgtgttccac
accggcgagcagaactacatggattacggcaagatcgacacgtggaacggcctcagggag
atgtcgtggtggtcttccaattcgagcaacatgatcaatggtacagacggcgcagtcttc
caccctctgatcaacaggaacgagctgctctacatctttgctgctgatctctgcaggtct
atccatctagcctacgtaaaagacgttgaggtgaaaggcatccaggcgtaccgctttgca
cccccaaacgatgttctcatgaaccccaaggaaaaccccgccaacgcgggcttctgtgtg
ccagctggagactgtctcggcaccggggtgcttaaagtcagcgtttgtcgcgaaggtgct
cccatcgtggtatcttttccccacttttatcaagccgacccaaagtacatcaatgctgtt
gaagggcttaaccccaacaaggaggagcacgagacgtatctggacctgcaaccgacctca
ggggttcccatccgtgcctgcaagagagctcagctcaatatcatcctgaaaagagtcaca
ggcttccctaaaaccaagttgatccatgagaccattttccccatcatgttcgtcaatgag
actgcaaccatcgatgatgattctgcatcccagatgaggacactcctcctgattgtgact
ctggtgtcaaacttccctttgctcatcgtgggcatgggcatcatcctgctgctggtgctg
gtcgtcttgttctgtcgaaaccgccagaagaagaatgaagtaaaacgtattgattttact
gaagcttttcattcttttgctacggtgaaagacgacacggcctacactcaggtcagcgac
aaacccgacgagccgtcagaaatgcccgccaatcagccaatgaagaacggctcctacatt
gccatgtctccagtggaggcccagaagtgttga
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