Trematomus bernacchii (emerald rockcod): 117472614
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Entry
117472614 CDS
T09643
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117472614 (adamts13)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
117472614 (adamts13)
Peptidases and inhibitors [BR:
tben01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117472614 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_CR_3
TSP_1
ADAMTS_CR_2
Reprolysin
TSP1_CCN
Reprolysin_3
TSP1_spondin
Reprolysin_5
Adt-1
Reprolysin_4
Reprolysin_2
CUB
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
117472614
NCBI-ProteinID:
XP_033973799
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MLKQSRSSHRKRGNMFFTTLLCLPLLWPGFAALLTSPLEEVGGKLRANRSTALSHHSSKQ
RDIVSSPGSSPDTSVSGRLPRSALMPDITHLELLVVVGPDVQQVHKQDTERYILTNLNIA
SELLRDMALGANMRVHLVRMIILSEPEPEIQMSPNITSSLRSVCDWGRRINPSNDTDPLH
ADLLLYITRYDLVLPDGNKQVRGVAQLGGACSSEWSCVITEDTGFDLGITITHEIGHSFG
INHDGVGNTCSRSGFMMASDGGYNSVDLTWSSCSREQLLTFFSEGNAECVKDLPSLGGSL
QDWKPGLYYGVDDQCRIAFGSTARACSFTNPDLPACRVLSCHLHPDDDSSCKRLLVPLLD
GTECAPNQWCLKGRCVSADELSSSVVVHGSWSNWSEFSPCSRTCGGGVSHRTRKCNNPRP
AFGGDDCEGPDIEAGLCHQQPCEQMQLDFMAEQCSQTDLHPLYLLPNTASFYTWIPAIGF
GQGEEQCRYMCQSKGEHFLVSRGSQFVDGTRCESDSPPQYGSRATCLRGKCQLFGCDGVL
HSGKVMDVCGVCGGGGSSCTLTSDSYTGGQAREYTTFLSLPVNATQVHIVNRSPLFTHMA
VRVGDRYIVSGTSSMALSMTHPSPLEDHHLEYRLHLTPDLLPEMEELLLPGPLTEEINIQ
VYRKYGKEYGEKTNPNISYQFYLPNRNSDLIEIHPKGKWAVFTAPCSVSCGSGVQKHEYV
CVDEETNKHLEKHDCETPPPPVPLQTSCQLSPCPPRWDAGLFGPCSASCGGGERVHPVRC
VQEHGTNVVEVQDAECPPKTAPNAVEKCNLQHCPARWRVSEPGECSVVCGPGETERVVSC
VRPEHGQEVEVDQSFCSLQIKPPDTVPCVVDVCPIGWESKGETPMLKSGVLPRSRQAPVY
VWSPVISQCSKTCGNGTLQVWFSCVDHQTRLGVTDVHCDPTKKPPPQYETCNTSPCPRMW
HSKQGVCSVTCGGGVANRVLYCAGERDGEEEVVEDSECSDFPKPTAVVSCNNHSCPARWR
VFSASPCSASCDLGVAQRTVSCVQFFHGRESVVPEESCHAAIKPATTVPCLVRVCTFRWE
VKPWSQCSVPCGYGIQSRAVSCMGPSHPEPLSPQFCMHMPKPITIQGCYMGGCGDTTPTS
DVITAVTPQQQLDHPSPSPTEPITILQATAATIPAPKPRACGQLLLEESGIVDLKDLTGR
CMVSIGRPLDEVIYIKMESGSLNCSKKEFVAFFDRLALVRKCEQVAGSELTTRTNVLLVR
QNLLTPGNGVVFTYNSQKNIKKSHHQDCDIQLFSPTGVFENPTTANTNHTCRVLINAPPS
VKIKIQALHIGLMFNSTNSQSTYIMIRDMDVLKTNVFKGQQLFQWHSSGNMAEIEFHGDY
LNAKGSFRAEYSFMRLRH
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcagagcaggtcgtcgcacaggaagaggggaaacatgttttttacaactctg
ctctgtctgccgttactgtggcctggctttgccgctctattgacttctccattggaagag
gtaggtggaaaactgcgggcgaacaggagcactgcgctttcccatcactcctctaaacaa
agagacatagtttcctctcctggttcttctcctgatacctcagtgagtgggcggctgcct
cggtcggctctgatgcctgacatcacacatctggaactgctggtggttgtagggcctgat
gtccagcaggtccacaagcaggatacagaacggtacatcctcaccaacctcaacattgcc
tccgagctgttgagagacatggccctgggcgccaacatgagggtgcacctggtccgcatg
atcatcctgtcagagccagagccagagatccaaatgtctcccaacattacctcctctctc
agaagtgtttgtgactggggcagaaggataaacccctcaaatgatacagacccacttcac
gctgatcttcttttatacattacaaggtacgacctggtgttgcctgatgggaacaagcag
gtcaggggtgtagcgcagctggggggggcttgctccagtgaatggagctgtgtgatcaca
gaggacacaggctttgacctggggatcaccatcactcatgagattggccacagttttgga
ataaaccatgacggagtaggaaacacctgcagcaggagtgggttcatgatggcctctgac
gggggctacaacagtgtggatctgacctggtcgtcctgcagcagagagcagctgctcaca
ttcttcagtgaaggaaatgctgaatgtgtgaaggacctgccttcactgggaggctctcta
caagactggaagcctggtctgtattatggagttgatgaccagtgccgtatagcttttggt
agcactgcaagagcctgttctttcactaatcctgacctgccagcgtgtcgtgtcctttcc
tgtcaccttcaccctgatgacgacagctcctgcaaacgtctcctggtccctctgctggac
gggacagagtgtgcacctaatcagtggtgtctgaaggggcgttgtgtgtccgctgatgag
ctcagctcctctgtggtggtgcatggctcctggtccaactggtctgagttctccccctgc
tcccggacatgtggcgggggagtctctcaccgcacacggaaatgcaataacccaagaccg
gcttttggaggggatgattgtgagggaccggatattgaggctggactttgtcaccagcag
ccatgtgagcaaatgcagcttgatttcatggcagagcagtgttcccaaacagacctccac
cccctctacctgctaccaaacaccgcctctttctacacctggatccctgctataggattt
ggacaaggggaggagcagtgcagatatatgtgccaatcaaaaggagaacatttcctagtg
agccggggctctcagtttgtggatgggactcgctgtgagtcagacagcccgcctcaatat
ggctccagagctacatgtctcagagggaaatgccagctgtttggctgtgatggtgtgctg
cattctgggaaagtgatggatgtgtgtggggtgtgcggtggaggcggatcatcctgcact
ttgacctctgactcctacactggtggtcaggctagagagtacaccaccttcctctctctg
ccggtgaatgccacacaggttcatattgtcaacagatcacctctgttcactcatatggct
gtaagggttggggatcggtacattgtgtctgggacaagcagcatggccctgagtatgacc
cacccctccccactggaagaccaccatctagagtaccgcctccacctgacccccgacctt
ttgcccgagatggaggagctgctgcttccagggccgctgacagaagagataaacatacaa
gtgtatcgcaaatatggaaaagaatacggagagaaaacaaatccgaacatcagctaccag
ttctatttacctaacagaaacagtgacttgatagagatccaccctaaaggcaaatgggcg
gtcttcacagcgccgtgctctgtctcctgcggctctggtgtacagaagcatgaatatgtc
tgcgtagatgaagaaaccaacaaacatttggagaaacatgattgtgaaacgcctcctcca
cccgtaccactccagacaagctgtcagctctcaccctgtccccccaggtgggatgcgggg
ttgtttgggccttgtagtgcctcctgtggtggaggagagagagtgcatcctgtaagatgt
gttcaggaacatggaaccaatgtggtagaggtccaagatgctgaatgccctcctaaaaca
gctccaaatgctgtagaaaaatgtaacctgcagcactgtcctgccagatggcgtgtgtca
gaaccaggggagtgctcagttgtgtgcgggccaggagaaacagagcgtgttgtttcatgt
gtccggccagaacatggtcaggaagtggaagtggatcaaagcttttgttctctgcagatc
aaaccacctgacactgtgccctgtgtggtagatgtctgtcccattgggtgggaatcaaag
ggagagacgcccatgctgaagtctggtgtgctgccacgctccagacaggctccggtctat
gtctggagtcctgttatcagtcagtgctcaaagacctgtgggaatggaaccctgcaggtg
tggttctcctgtgtggaccaccagaccagactgggggtaacggacgtccactgtgatcct
actaaaaaacctcctcctcagtatgagacctgcaacacatctccctgcccccgcatgtgg
cactctaagcaaggagtctgcagtgtaacgtgtggaggaggggtggccaacagggtgctg
tactgtgcaggagaaagagacggggaggaggaggtggtggaggattcagagtgcagtgac
tttcccaaacccacagcagtagtttcatgtaacaaccacagctgcccagccaggtggagg
gtgttcagtgcatcaccctgctctgcgtcctgcgatttgggtgtagctcagaggactgtg
tcctgtgtgcagtttttccatggcagggagagtgtggtgccggaggagagctgccatgca
gccatcaaaccggccaccacagtgccctgcctggtgagggtctgcaccttcagatgggag
gtgaaaccttggagccagtgctcggtaccatgtgggtacgggatccagtccagagccgtg
tcctgcatgggcccctctcatccggagccccttagccctcagttctgtatgcacatgccc
aaacccatcaccatacagggctgctacatgggcggctgcggagacacgacaccaacctca
gatgtcataactgcagtcacaccacagcaacaactggaccatccttctccgagtccaaca
gagccaatcaccatcctacaggccactgcagcgaccatcccagcacctaaacccagggca
tgtggacaacttctcctggaagaatctggcattgtggatttgaaagacctgacaggccgc
tgcatggtatccattggtcgacccctagatgaggtcatctatattaaaatggaatctggc
tccttgaactgcagcaaaaaggagtttgttgcattttttgaccgactggcattggtgagg
aagtgcgagcaggtagcaggcagtgaactcaccaccagaaccaacgtcctgctggtgcgt
cagaatctgctcacccctgggaacggggttgtgttcacctataattcacagaaaaacatc
aagaagagccatcatcaggattgtgacattcagctgttttccccaactggcgtctttgag
aatccaacaacggcaaacactaaccacacctgcagagtcctcatcaatgcccctccctca
gtaaagatcaaaatccaagcgcttcacatagggttaatgtttaactccaccaactcccaa
tctacatacatcatgatccgggacatggatgtcttaaagaccaatgtgtttaaaggccaa
cagctgtttcagtggcactcctctggaaacatggctgagattgaatttcatggagactac
ctgaatgccaaagggagtttcagagctgaatattcctttatgcgtctcagacactaa
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integrated database retrieval system
