Trematomus bernacchii (emerald rockcod): 117472635
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Entry
117472635 CDS
T09643
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117472635
Cilium and associated proteins [BR:
tben03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117472635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_9
TPR_NPHP3
TPR_19
TPR_6
PUB
BTAD
ARM_TT21_5th
HlyE
DUF4698
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
117472635
NCBI-ProteinID:
XP_033973826
LinkDB
All DBs
Position
Unknown
AA seq
2487 aa
AA seq
DB search
MEKQATLKEKFSIFGSRTAGRPIRCISGDDGARCGLSKAEFMEKVQQSNEACQRGDFQAA
IHLYTNALQADPQNCILFSNRSAARLKLGQHQAALEDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMIEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRSYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDLPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAMMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLAVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLTIARDTQDRILEGDASCGLGTVYQSMGEYETALRCHQSDLEIAEEAGSPARQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGMSEVGSDFQ
EGGNGGVVCGSSLEQYIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSTNMNDSVKNHNRSCQSMTSLFSNTMSPAKDGTSSLPRRSS
NLGKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYL
YERFSLIAIPSIQGLGSNAKTNSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPS
AEEEAHMVAELLGCQPLAGPAATKERVMSALSQAECAHFATHISWKLAALVLSPNPESVP
GGSSASGGVGTLGRGAGGRRGSSGRGRKGSGSGYTIPESLHMQDDSSDLESICDSPPLQE
FLLTAADILDMRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGVQCTLVSLWPVPVA
ASKVFVHAFYTAMLNGTKASAALADAMKNVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSL
IGQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQA
LLTAVGFRLDSVGSGMPCAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASE
AGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLQPIQVSISVQLWRLPGCHEFLAALG
FDLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQS
VSNPMPMGYSSLPFSPPYLDNQASDAISVYSLSSVASSMSFVSKTDCDFLGHRQRGGATA
HYSIHKHPHVPRSRSSPHGAAAAAVAGARGDDEEYEGFSIISSEPLGSHCDSLPLPPGHS
QRHRGGRGVVGGSSTGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPSQKVGKVSSSD
TGESDQSSTETDSTVKSQEEKAVPLDPQELAQKILEETQSHLRAVGSLQRAGPEGAAAVG
TSVRSSAFRSSETSAFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAISESSQR
EGSHPSPTLDSQFRLKYPSSPYSNHISRSPSNVSPISGHLSPAGSAPSPALSYSSTGSTC
STSADIPDLDRLRRGVIDEKVQAIHNLKTFWANAAAQHQSHLGPVRAVHGAPGPLASAGR
DVLSLLNLSPRRCSPNDNQDSLELRELGLQSLDRNNKNGHNFSNPRQVAPSPTISTSSSP
GPRSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttccatattcggttctcggacagcgggc
agacctattcgatgtatttcaggagatgacggggccaggtgtgggctcagcaaagcagag
ttcatggagaaagtgcagcagagcaatgaggcatgtcagcggggtgactttcaggcggcc
atccatttgtacaccaacgccttgcaggctgacccacagaactgcatactgttcagtaac
cgctcagcagcccgtctcaaacttggacagcaccaggcggcactggaggacgctgaaaaa
gcctgcgagctcaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgccttcgcctccgggctggcccaagacccc
aagagcctgcagctgctggtgggcatgatagaagccgccatgaagtcgccgttacgagag
tctctggagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcgagccaccacacagcctctgttgtg
gtgctggaagccgctttgaagatcggcacatgcagcctcaagctccgcggctccgtcttc
tccgccctcagcagcgcccactggtccctgggcaacacagagaagagcactggctacatg
cagcaggatctggaggtggccaagaccttaggtgaccaaacaggggaatgccgcgctcat
ggcaatctgggctcggcattcttctccaagggaaactaccgcgaagcgctgaccaaccat
cgcaaccagctggttctggccatgaagctgaaggacagagaggctgcttcaatggcgctg
agcagcttgggccatgtatatacagccattggggactatcccaatgccctcgccagccac
aagcagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
gggaacatgggggccgtctacatcgccatgggagactttgaaaatgctgtccaatgccac
gagcagcacctgggcatcgccaaggccctggaaaataaacgagaggaagctcgggcctat
agtaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccat
actcatgttctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctac
gcagggctgggtcatgctgctcgctgcatgcaggacttggagagggccaagcagtaccac
gaacagcagctgtctatagctgagggtctgaaggacagggccgccgaggggagggcctcc
tccaatctgggcatcatccaccagatgaagggggactatgagaccgcactgaaactccac
aaaacacacctggccattgctcaggagctgaatgactatgctgctcagggccggtcctat
ggcaacatgggtaacgcctacaatgccctgggagccttcgaccaggctgtccgataccac
cgccaggagctccagatttccatggaggtaaatgaccgggcctcgcaggcgtccacccat
ggaaacctggccgtggcttaccaagccctgggagcccatgaccgtgctctgcaacattac
cagaaccacctcaacattgctcgtgagctcagggatgtccagagcgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagttccctcaggctgtgccgtactat
gagcagtacctccgcttgtcccccgaccttcaagacatggagagcgaagggaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactaccaggatgccgttaaatactat
gagcaggacttagctctggccaaggatcttcatgacaaactgagtcaggccaaggcttac
tgtaacctcggtttggcttttaaagcgctgggagacttcactaaggcagaggagtgtcag
aaatacctgctgtcactggcccagtccctgaacaatgcacaggctcgcttcagagctctg
gggaacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttac
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaggcatgtgcctat
gccgccctcggggccacctacagacttgtgcagaaatatgacaaagctctaggctaccac
acccaggagctggaggtctatcaagagctgggcgacttgccaggagagtgcaaagcccac
ggtcacctggcagctgtctacatggctctggggaaatacgccatggcctttaagagctac
gaggagcagttggagctaggtcgcaggctgaaggatcccgtagtggaggctcaagtgtac
gggaatatgggcatcactaaaatgaatgtaggcgtgatggaggaagctattggctatctg
gagcagcagctggccactttacagcagctgagtggcaacgaggccatgatggacaggggc
agggcctatggaaacctgggagactgttatgaggctttgggagactttgaggaagccatc
aagtattatgaccagtatctggctgtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagaggcttaggcaatggacacagggccatgggaaacctacagcagtcgctt
gtgtgttttgagaagcgtctggtagtggctcatgagctgggggagtgtggaggcaaggct
caggcctacggtgaactgggcgcactgcacagccagctgggaaattacgagcaggcgatt
tcctgtctggagcgtcagctgaccatcgcccgtgacacccaggaccggatcttagagggt
gacgccagctgcggtttgggcactgtatatcaatctatgggagagtatgagacggccctg
cgatgccaccaaagtgacctggagattgcggaggaagcgggcagtccagcgcgccaggcc
cgcgcctatgggaacttgggccttacctacgagtcgctcgggaactacgagcgggcggtg
gtgttccaggagcagcacctgagtgtggcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggaggacacaccacgcactgcaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggcg
aagatccgccatcgtcttgggctctctctgtgggccagtgggaatctggaggaggcccaa
catcagctctaccgggcttctgcactgtttgagaccatccgccatgaagcccagcacagc
acagactataaactctccctgttcgacctgcaaacctcctgctaccaggcactccaaagg
gtcctcgtcagcctaggccaccacgatgaggctctggcagtagcggagcggggtcgcaca
cgagccttcgctgacctcctggtggagcggcagacaggccagcaggactcggacccctac
accccggtaacagtggagcacatattggacaccgtcaacagccagagggcgttggtgctt
tatttctcaatggcggctggctacctgtacagctggctgctggctccaggagcaggcatc
ctgaagtttcatgaggtgtatctgggcgagggcatgtcagaggtagggtctgacttccag
gaggggggcaacggaggggtggtttgcggctcctcgctggagcagtacatcgctagtgcc
cgtgaggctctgggagttgaatcgtattacagcagagggtgctcgagcagcgagacagag
agcgaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactct
gtcaccgatccaacgggcttcctgcgcatggtgtccagaaacaacctgttcaacagatca
acaaacatgaatgacagtgtaaaaaatcataataggagctgccagagtatgaccagcctg
ttcagtaacaccatgtcacccgccaaagacggtacctcttcgctgcctcgtcgctccagc
aacctcggaaagcctccactccgggcactttatgatttgctcattgcacctatggagggg
ggcttgatgcactccagtgggccagttggcagacacagacaactggtgatggtgctggag
ggagaactgtacctcatccccttcgctctgttaaaaggaagctcctctaatgaatacctc
tatgagcgcttcagcctcatcgccattccctccattcaaggcctcggatcaaatgcaaag
acgaactcccggcgccctggaccagctccttgtggaggtgtctccatggcggcagtggtg
gggaacccccgcctgccctcacctgtcatggaccgctggctgtggggacccatgccctct
gcagaagaggaggctcacatggtggcagagctgctgggctgccaacccctggccggccct
gctgctaccaaggaaagggtgatgagcgccctctcacaggctgagtgtgctcactttgcc
acccacatttcctggaaattagcagctctggtgctctccccgaaccctgagagcgtgcct
ggtgggtcgagtgccagtgggggagtagggacattggggagaggggccgggggaaggaga
ggcagcagtggtcgaggcaggaagggctccggaagtggctacaccatccccgagtccctc
cacatgcaggatgacagcagtgacctggagagcatatgtgatagtccgccgctgcaggag
ttcctgctcacagctgcagatatactggacatgaggttgccagtcaaactagtggtgctt
gggtcgtaccaggagtccagcagtaaagtgactgcagatggagttgtgggattgacccgg
gccttcctggctgccggggtgcagtgtactctcgtgtccttgtggcctgtccctgtcgca
gcctccaaagtttttgtccatgctttttacactgccatgcttaatgggaccaaagctagt
gcagcactggcagatgccatgaagaatgtccagagcagcaagcagtactcgcacccctcc
aactgggcaggatacatgctgattggaaatgatgtgaagcttaacagtccctcttccctc
attggccaagctttggcagagattctacagtatccagatcgagcacgagatgctctgaga
gttttactccacctggtggagaagtctcttcagaggatacagaacggccagcggaactcc
atgtatacatcccagcaaagtgttgagaacaaggtggggggggtccctggctggcaggct
ctgttgacagccgtgggcttccgtcttgactctgtgggcagtggtatgccctgtgccgtc
tttttccccactgcggatccaggagacagactccagcagtgcagcaccactttacaatca
ctgctgggtctgccgccgccagctctccaggctttgtgcaaactcatcacagcttcagag
gcaggagagcagctcatcaatcgggctgttaaaaatatggtggcaatgctccatcaggtg
ctagtccaactacagacaggagaaaaagaacaggatttctccctccagcccattcaggtg
tccatcagtgtgcagctatggaggctgccaggatgccatgaatttctggctgctcttgga
tttgacttatgtgaggtaggccaagaagaagtggtgctaaagacaggcaagctagccaac
cgccgcaccttgcactttgctctccagtctctgctggcgctgtttgactccacagaactg
cccaagcgtctaagcctggacagctcatcttcccttgagtctctagcttcagcccagtct
gtgtctaaccccatgcccatgggatactcaagccttcctttctctcctccttacctggac
aatcaggcctcagatgccatctctgtgtatagcctcagctctgtagcctcctccatgagc
tttgtttccaagacagattgtgatttccttggtcatcggcagcgcggtggggccacagca
cactactctatccacaaacaccctcatgtcccccgcagtcgctcgtctcctcacggggca
gctgcagcggcagtggctggagcccggggggatgatgaggaatatgagggcttttctatt
atcagcagcgagccactgggaagccactgtgactctctgcccctgcccccaggccacagc
cagcgccaccgtggaggcaggggggttgttggtgggtccagcacaggagcagggagaggc
tacactgtatcagtatcgtcaaggggcagtgtcagcacccccacatcccccgttaaaaca
tgcctggtgcccagcccaaactcaccatcccagaaggtgggaaaggtgagcagctcagat
acaggtgaatcggaccagtccagtaccgagacggacagcactgtcaagtctcaggaagaa
aaagctgtccctttggaccctcaggagctggcacagaagattctggaggagactcagagc
catctacgggctgtgggtagtcttcagcgggccgggccagagggtgcagcagctgtagga
acctcagtgcgaagcagcgccttccgctcttctgaaactagtgcgttcagccgtcctaac
agcagtgctagtggccgagctcaatcttcccccagacccaaacctccctcccgttcctct
tctcttcagaaaataagctctggctacaacagtcctgcaatctctgagtcttcccaaagg
gagggcagccatccttcgcccactctggacagccagttcagattgaagtacccaagttct
ccatacagcaaccacatctctcgctctccgagtaatgtgtctcccatttcaggtcacctt
tccccggcaggaagtgctccatcccctgccctgtcgtactcctctacaggctctacttgc
tctacttcggctgatatccctgacttggaccggctacgaagaggggtcattgatgaaaaa
gtccaagctattcacaatctgaagaccttttgggctaacgctgcagcccagcaccagtca
cacctaggtcctgtcagagctgtccacggtgctcctggccctcttgcttctgctggcagg
gatgtactgagccttctgaacctctctccacgtcgttgctcccctaatgataaccaagac
agcctggagctgcgggagctggggctgcagtcactagataggaacaacaagaacggacac
aacttctccaaccctagacaagtggccccgtcacctacaatttccacaagcagtagccct
ggtcctcgttctatccgactacctgctggcaatggatacaagttcctgtcgcctgggaga
tttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
