Trematomus bernacchii (emerald rockcod): 117472653
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Entry
117472653 CDS
T09643
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117472653
Membrane trafficking [BR:
tben04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117472653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
C1_2
Ank_5
PHDvar_NSD
PilJ
PHD_2
Motif
Other DBs
NCBI-GeneID:
117472653
NCBI-ProteinID:
XP_033973850
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MLCFIVPGHNLAEVVSVQAYLCSETTPLTWVGGASLEYVQDDAQDLAEHLVVHGHCLSSR
DHKDLSSLFNLGQQSSRWAMDRRVTLAMANLDIPQNWNVLGSHSGDEHSFRESPLHMAVR
WGLYRLAELLLCQPGGLMAVSLPNEEGVTPLQLAQTAGNTELLELLTHPPNPLATPPAGL
SQVWADRSRLLRFCHDMGNLTLTVRQNLRWSSEDSRHADILLLRDRLRDEDFLREIKALR
RERVETLSGKEELVDDPAETALYSDMKRAAVEENDYEELLMFCLHEEDEVDDPSHFDSEK
SQSIGESPARSPTLAAAARLSAMIHGKDRVYANAMLVDQVDEADIKYRSPGEEEGSPAPH
LGSPCWDPFSMTPPDSGNCSQNRHPSSPHNEERGIQGPGLENHREPSPRMSPPCPFASSP
SFPSSPLASAFHMFEGAQRRQTQPGLPVSPALNRRGCSLTETSRGLSPSLECDSGEEDIL
GYSYPCSSVKKQSILRSSSGEERDSFETSPDFNRTLSDSTDTSAKNPEKAEVRLRSYSYS
SPKAKPSRPLLNRDATITDLAEEQRAFTLTETTREKRILGFRKRALSAEEESSASLQHLT
LTEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKVKGKEVKEGKEK
PGAANGHQFVPASPSGPALCVACEKSVSGKELLQCSSCFLNVHKSCRESVAACGKKPQER
NAMLMKSKTMSLPNNSVKENSQAFSSSSTLPTTTRERRETVAPLSKSLSISIDTRRLSDA
AGADAECSVTACTNNSLSNEGTPVTANPPPTEPPITTQDVDAPPLMSDLSAELLGLDVES
WSLAVSKEFCRPLDRRTTKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEELQLDLDCV
ARIFPCLDPLLLFHKNLFGALQERRQAATQPENPRNYLIHHIGDILLQQFSDENAEKMKQ
VYGEFCSHHTDAVNVFKELQQQSKKLQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPV
LLERILHYTQEGGQEHSDLSRALAQIRDIIAAVDLTVNKYERCQEMQEVLARLENKSFAK
LKNDKVFRKQDLHSKHRELHYKGLVFWKTATGRLKDTLALLLTDVLVFLQEKDQRLVFAA
VDQKPPVIPLQKLIVREVANEERGMFLISASSVGPEMYEVHTTTRDERNAWMRHIRKAVE
SCPEEEEEEEHSAETEEARRVAEVRVQKITKFQETLLSQDQQICSSLEEKLQLYAELTEL
TLCSPEPVLQRHLLVQPDANTEPQASSLLTAALREAENLITMLQARDGLSVKSQSSPLRG
PECFSYNSHGSSIQESPSEPDYLSTLSLSSTSLGSDSEMTGLDNAVWSSAVELKKGDSKG
TLSKVSESVHGLTQLLYSLQAAVTLQDSCCEVQKLLLQEGERPQLRTLSSLQNSLEQRSI
DKKKEDVEKKGLERKKEEVDEVKKLHVKLKQEQQRWDKECLVREKQQCEQESVLEQREQQ
CLLEAERLRCEREELETQLQEYQQNLDRLREGQRSVEREKEQIEAQQRQLQRWRHTRQSS
LPVSIPLDIYKSQMPSHSRSGSLDGNSSAFQNEAVLLASLQQNRLHQPPNNNNQRLLSAP
RRSQDIPLRSSSYTANLGLSASLYNSLNTLLSQAHSKQPAEGLEYPNYSNPHAVPRPLNA
SIHPFSSRVTAQPQTTNNNFSQSFDRPSPGPWRSEVTGHRLYEDGYSSSPSLTPLLPPQA
YLSLEGQNGEEGVEENIVYL
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctttatagttcctggtcataacctggctgaggtggtgtctgtgcaggcctac
ctgtgttctgaaactacacccctcacctgggtgggcggggcttctctggagtatgtccaa
gatgatgctcaggacctggcagagcacctggtagtccacggacattgccttagctccagg
gatcacaaggatctgagcagcctcttcaatctgggccagcagagctctcgctgggctatg
gatcgtcgcgtcaccctggccatggcaaatctggatatcccccaaaactggaatgtacta
gggagccacagcggagatgagcacagtttcagggagtctcccctccacatggccgtgcga
tggggtctgtatcggcttgcagagctgctgctttgtcagccggggggtctgatggctgtc
agtctgccaaacgaagagggagtgacaccgctgcagctggcacagacagccggcaacacc
gagctcctggagctgctcacacacccccccaaccctctggccacgcctccagcaggtctg
tcccaggtgtgggccgaccggtcccgcctgctcaggttctgtcatgatatggggaacctg
actctgaccgtccgacagaacctgaggtggagctcagaggacagtcgacacgctgacatc
ctgcttctcagagaccggctcagagatgaggactttctcagagagatcaaagctctcagg
agggaacgtgtggagaccctctcggggaaggaggagctggtggatgatcctgccgagacc
gcactgtattctgatatgaaaagagctgctgtagaagaaaatgactacgaggagctgctg
atgttttgcctgcatgaagaggacgaggtggacgacccatcacactttgactctgagaaa
agccagtccataggggagagcccggcccgctcccccactctggctgctgccgccagactg
tcagcgatgatacatggcaaagacagggtgtacgctaacgccatgctggtggaccaggtg
gatgaagctgacattaaataccgctctcccggggaggaggaagggagccctgcgccacat
cttggcagcccgtgctgggaccccttctccatgaccccccctgactcagggaactgttcc
caaaaccggcacccgtcctcaccccataatgaggagaggggaattcaaggccctggccta
gagaatcacagggagccatcccctcgcatgtctcccccatgtccctttgcttcctccccg
tcttttccttcctcccccctggcttccgccttccatatgttcgagggagcacagaggcgt
cagacgcagcccggtctgccagtttctcctgctttgaaccgcagaggatgcagcttgacc
gagacgagccggggcctgagtcccagtttggagtgtgacagtggagaagaagacatactg
ggatattcctacccctgctcgtctgtaaagaagcagtccatcctgcgttccagctcagga
gaggagagggactctttcgagacatcgccagactttaaccgcacgctctctgacagcaca
gacacgtccgctaagaacccagagaaagccgaagttcgcctgcgctcctactcctactcc
tcccccaaagcgaagccgtcacggcctctgctaaaccgagacgcaaccatcactgacctg
gcagaagagcagagagcattcaccctgactgagactaccagagaaaagaggattttgggt
ttccgtaagcgggccctgtcagccgaggaggagagcagcgcttcgctccaacacctcacc
ctcacagagttcctcaaagagattgaagatgaggagtgggataaatacataatcccatca
aaggtcgagtcagagaagtacaaagtcagccggaccttcagcttcctcaagagcaggatg
tccagcactcggaacaaaaccaaggtgaaggggaaagaggtgaaggagggaaaggagaag
ccaggagcggctaacggacaccagtttgttcctgcgtctccctccggtcccgctctctgt
gtggcctgtgaaaagtctgtttctgggaaggagctgctgcagtgctccagctgtttcctg
aatgtccataaaagctgtcgagagtctgttgccgcctgcggaaagaagccacaggagagg
aatgcaatgctgatgaaaagcaagaccatgtctctcccaaacaactctgtgaaagaaaac
tctcaagctttctcctcttcctctacacttcccaccacaaccagagagaggcgagaaaca
gtcgcccctctctccaaaagcctctccatctctatagacaccaggaggctgagtgatgca
gcaggggcggacgctgagtgcagtgtgacagcttgcaccaacaactcattgtctaatgaa
ggaacacctgtcactgcgaatcccccgccaaccgagccgccaatcaccacgcaggatgtt
gatgctcctcctctaatgagcgacctgtcagctgagctgctggggctggatgtggagtcc
tggagtctggccgtcagtaaggagttctgcaggccgctcgacaggcgcaccacgaagcga
caggatgttatttatgagctgatgcagaccgagctgcaccacatccagacgctgacggtc
atgtccgaggtgttcaggagaggcatgctggaggagctgcagctggacctggactgtgtg
gcccggatctttccctgcctggaccccctgctgctttttcacaaaaacctcttcggagcc
ctgcaggaacgcagacaagctgcaacgcaacctgagaacccccgaaattacctcatccat
cacattggagatattctgcttcagcagttctcagatgaaaacgctgagaagatgaagcag
gtgtacggagagttctgcagccatcacaccgatgccgtcaatgttttcaaagagctgcag
cagcaaagcaaaaaactgcaaaactttgtcaaacaacagagcaataacactctggtccgg
cggagagaggtgccagaatttatcctgctggtcactcagcgcatcaccaagtaccctgtc
ctgctggagaggatattacattacactcaggagggaggtcaggagcactctgacctgtca
agggccctggctcagatccgcgacatcatcgctgcggtggacctcacagtgaataagtat
gaaaggtgtcaggagatgcaggaagtgctggcccggctggagaacaagagcttcgccaag
ctaaagaacgacaaggtgtttcgcaaacaggatctgcatagcaaacacagggagctgcat
tataaagggctggtcttctggaagactgccaccgggcgtctgaaagatactttggctctg
ctgctcacagacgttctggttttccttcaagagaaagatcaacgtttggtatttgctgcc
gtggaccagaagcctcctgtaatccctttgcagaagctcattgttagagaagtagccaat
gaggagagaggaatgttcctcatctccgcctcctcagtgggaccagagatgtatgaagtt
cacaccaccactagagacgagaggaatgcatggatgagacacatacgaaaagctgtagag
agttgtcctgaggaagaggaggaggaagagcacagtgctgagacagaggaggcccggcga
gtggcagaagtgagagttcaaaagatcacaaagttccaagaaaccctgttgagtcaggac
cagcagatctgcagcagcctggaggagaagttgcagctttatgccgagctgacagagtta
accctgtgttcaccagagcctgtactgcagcgccatcttctggttcaacctgacgctaac
actgagccgcaggcctcctcactgctcactgctgcactcagggaagcggagaacctgatc
actatgctgcaggctcgtgacggcctttctgtaaaaagtcagagctctccgctccgagga
ccagagtgcttcagctacaacagccatggcagcagcatccaggagtctccctctgagccg
gattatctgagcacactcagtttgagctccacctctctgggatcagacagtgagatgacg
ggtctggacaacgcagtgtggagctctgctgtcgagctgaaaaaaggagactccaaaggg
acactctcaaaggtgtcagagagcgttcatggtctgactcagcttctctacagtctgcag
gctgctgttaccctgcaggacagctgctgtgaagtccagaaactccttctccaggaagga
gaaagacctcagcttcgaaccctctcatccctccaaaacagtctggagcagagaagcatc
gataaaaagaaagaggatgtagaaaagaagggtttagagaggaagaaagaagaggtggat
gaggtaaagaaactgcatgtgaagctgaaacaggagcagcaacgctgggacaaagagtgt
ctggttcgagagaaacaacaatgtgagcaggagagtgtgctggagcagcgggagcagcag
tgcctcctggaggccgagcggctgcgctgcgagcgagaggagctggaaactcagctgcag
gagtaccagcagaacctggaccgcctgagggagggccagaggagcgtggagcgggagaag
gagcagattgaagcccagcagaggcagctgcagaggtggagacacacccgccagagcagc
ctgcctgtcagcataccgctggacatatacaagtcccagatgcccagccacagccgctca
ggcagcctggatggaaacagctcggcgttccagaacgaggcggttttactggcgtccctc
cagcagaaccgcctccaccagccccccaacaacaacaaccagcgcctgctctctgcgccc
agaaggagccaggacatccctctgcgcagctccagctacaccgccaacctgggcctcagt
gccagcctctacaacagcctcaacaccctgctgagccaggcccacagcaaacagcccgcg
gagggtctcgaataccccaactacagcaacccacacgcggtcccccggcccctgaatgcc
tccatccaccccttcagcagcagggtcactgcacagccacaaacgaccaacaacaacttc
agccagtcgtttgacagaccatccccgggtccctggaggtcagaggtcacaggtcacaga
ctttatgaggacggctactcctcgtctccctctcttacccccctccttcccccacaggcc
tacctctctcttgaaggacagaacggagaggagggagtcgaggagaacattgtttatctc
tga
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integrated database retrieval system
