Trematomus bernacchii (emerald rockcod): 117472731
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Entry
117472731 CDS
T09643
Symbol
g3bp1
Name
(RefSeq) LOW QUALITY PROTEIN: ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117472731 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117472731 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117472731 (g3bp1)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117472731 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
117472731 (g3bp1)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117472731 (g3bp1)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117472731 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
117472731
NCBI-ProteinID:
XP_033973992
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPAEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESEDEVEEIEERIPSPDIAQEDSAPFYDPTPCS
EPTAPGDDEEVAASPEPEPEEEKEVEVVELKPETPLETQTETNTSDEQTEKSPAAAPPTA
EPITTEPTPAAPEENRQFSWASVTSKNLPPSGAVPVSGVPHVVKAPTAPPRAEVKSETQT
AATRPQRDQRPNREQRPGGPPPVHRGPRPVREGEQGETESRRVVRYPDAQQLFVGNVPHD
VDKTELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIMFRGSVRLNV
EEKKTRSAREGDRRDVRPRGPGGPGGPRERIGGGGGGGGRGGGGGPPTRGGMAQKPSFGS
GRGAGPSESRYPNPRQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acactcctgaaccaggcgcccgactacctgcacaggttttatggaaagaattcgtcctac
gttcacggcggtttggacaacaacggcaaaccagctgaggctgtttatggacaatctgag
atccataagagggtaatggctctgagtttccgcgactgtcacactaagatccgacacgtt
gacgctcacgcgacgctgaacgagggcgtggtggtgcaggtgatgggagagctgtccaac
aacatgcagcccatgaggaagttcatgcagaccttcgttctggcaccagagggaactgtt
gcgaacaaattctacgttcacaacgacgtgtttcgttaccaagacgaggtgttcggagac
tccgattcagagcctccagaagagtctgaggatgaggtggaggagatcgaggagaggatc
ccctcccccgacatcgctcaggaggactcggctcctttctacgaccccacaccctgttca
gaaccgacggcccccggagacgatgaggaagttgcagcgagtccagaaccagaacctgag
gaggagaaggaggtcgaggtcgtggagctgaagcctgaaacgccgctggagacgcaaacg
gaaacaaacacatcggacgagcagacggagaaaagcccggccgccgccccccccacagct
gaacccatcaccaccgaaccaacacctgccgctccagaagaaaacaggcagttctcctgg
gcgtccgtcaccagtaagaatcttcctcccagtggagccgttccagtttcaggggtccct
cacgtcgtcaaagcccccacagcaccgccgagagccgaggtgaagtcagagactcaaaca
gcagcaacgagaccacagagagaccagagaccgaacagagaacagagaccaggaggacct
ccaccagtacacagaggacccagaccagtgcgggaaggagagcaaggagagacggagagt
cggcgcgtggttcgataccccgacgcccagcagctgtttgtggggaacgttcctcacgat
gtggacaagacggagctcaaggagttctttgagcaatatggtacagtcctggagctgagg
atcaacagcggagggaaacttccaaactttggtttcgtggtgtttgacgactctgaaccc
gttcagaagatcctgagcaaccggcccataatgttccgaggcagcgtgcgtctgaacgtt
gaggagaaaaagacccgttcggctcgggaaggtgaccgacgggacgtcaggcctcgaggt
cctgggggtcctggaggtcctagagagaggatcggaggtggaggaggaggcggaggaaga
ggaggaggaggaggcccccccacccgaggaggcatggcacagaaacccagcttcggctct
ggacgaggagcggggcccagcgagagtcgctaccccaacccgcgccaataa
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