Trematomus bernacchii (emerald rockcod): 117472734
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Entry
117472734 CDS
T09643
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117472734 (smarcad1a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117472734 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
T2SSK
Pyr_excise
Na_Ca_ex_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
117472734
NCBI-ProteinID:
XP_033973990
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MFNLDRFRYDKKTTKDNEEDSGSQSPESEKENKPAKMKPVKAQTKSNARGVVFEEVLTID
LEEDELISETKNKTLARKFKNPIGKSSKNVASDHTDDEDCELKEKTDRLLEMFPQLTRTQ
VLEVIKNTSTLDAAAAECILRFGDKEAPDQGRKRKQDGSGSSQDSGEDQPSKKNRPLEVS
DAEDEEDKGPSREKMEAMVRKLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMFSDPDE
SSFSSPDTDENKSRKSKSKETSSKDQSSKDHRKSRLHKDHRDSQSRKDRKDSEDNISSES
EEDNKGDPEGDPEGDAEVTHDSEDPDSDSSVDSRNKRSTSTLVKSPDLVSSSSSVKKFTT
SAFLMPSSSTSTSPAQMLSRFASGTSIAKKQAAERKKKVLASDEHVSSEGENDDEEEPVS
SEFEDSDEELDCKGGMTDLKKEMLQFFQDATIDELSLISGCSVKKAKKILERRPFEGWQS
LVDVFTKDKGLSESLLMGCRVVLKERKVVLGLMSKCQTISSKMVKQVTAVMERGTAAMKQ
PKLLNRNNQLKPYQLIGLKWMLLMYEHKLSGILADEMGLGKTIQAIAFLAELYQMGIEGP
HLIIVPASTLDNWVREMKLWCPSLKVVVYCGSLEDRRYLRHELLDDKTEYNVIVTTYNMA
IGNDNDRGVFRKLRLKYALFDEGHMLKNMNSLRYRHLMSINAEHRMLLTGTPLQNNLLEL
MSLLNFIMPSLFSSSTHQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLK
QLPAKVEKVEACPMSEKQQVLYQNMFKKLKTTIIGERRELCNVMMQLRKMANHPLLHRQY
YTTEKLKAMSKLMLKEPTHFDANAVLIQEDMEAMSDFELHLLCKQFSSIGSYQLETELLL
DSGKFHHLTELLASHKNKGDRVVLFSQFTMMLDIVEVLMRHLKHRYVRLDGSTPIADRIG
LIDEYNTDPDIFVFLLSTRAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKT
VQVTKLISKDSIEAIMLQLGQKKLKLEQDMTAAEGGEGTIPEDMASLLKASLGL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttagaccgttttcgttatgataagaagacaacaaaagacaacgaagaggat
agtgggtcccaaagtcccgagtctgagaaggagaacaagccagcaaagatgaaaccggtc
aaagcccaaacaaagtccaatgcccgaggagtggtttttgaggaagtccttacaattgac
ctagaggaggatgagctcatctctgaaacaaaaaacaaaacattagctaggaagttcaaa
aaccccataggaaaatcatcaaaaaatgtggcatcagatcacacagatgacgaggactgt
gaactgaaggagaaaactgacagattactggagatgtttcctcagttgacaagaacgcag
gtactggaggtaattaagaacacaagcacattggatgcggctgcagctgaatgcatttta
agatttggtgataaagaagccccagaccaaggcaggaagagaaagcaggatggatccggc
agttctcaggacagtggtgaggatcaacccagcaagaagaacaggccgttagaagtttct
gatgcagaagatgaggaagacaaaggtccaagccgggagaagatggaagccatggtcaga
aaactgcagaaaaagtttcctgaccaggacaaggaggagctgcgtatggttctgcaggaa
cacgactggaatgtagaggatgccctgcaggttctacagatgttctcagaccctgatgaa
tccagtttcagctctcctgacacagatgaaaacaaatccaggaaatccaagagcaaggaa
acgtcgagcaaggaccagtcgagcaaggaccacaggaagtcgaggttacacaaagatcac
agagacagtcaaagtagaaaagatcgaaaagactccgaagacaacatatcaagtgaatca
gaggaggacaataaaggtgatccagaaggtgatccagaaggtgatgcagaagttacacac
gacagtgaggatccagattccgacagcagtgtagattcgagaaacaaaagaagcacttca
acacttgtaaaaagtcctgacttggtttcttcatcatcctctgtcaagaaattcacgacc
tcagcattcctgatgccatcctcctctacctctacctctcctgctcagatgctttccaga
tttgccagtgggaccagtatagctaagaagcaggcagcagagagaaagaagaaggttctt
gcctcagatgaacatgtcagttctgagggtgaaaatgacgatgaagaggaaccggtaagc
agtgagtttgaggactcggatgaggagctggattgtaaaggtggcatgacggatctgaag
aaagagatgctccagttcttccaggacgcaacgatcgatgagctgtcgctaatctctggg
tgctctgttaaaaaggccaagaagattttggaacggaggccctttgagggctggcaaagt
ctggttgatgtcttcactaaggacaagggactatcagagagcttattgatgggctgcaga
gttgtcttaaaagagcggaaggttgtcctggggctgatgtccaaatgtcagaccatttcc
tcaaaaatggtcaaacaggtcactgcggtaatggagaggggcacagcggccatgaaacag
cccaaactcctcaacagaaataaccagctcaaaccctatcagctgattggtctaaagtgg
atgctgcttatgtatgagcacaaactgagtgggatcctcgctgatgaaatgggtttgggg
aaaactatccaggctatagcatttctggccgagctgtaccagatgggaatagagggtcct
cacctcatcattgtgccagcctccacactggataactgggtcagagagatgaagctgtgg
tgtccaagcctcaaagttgtagtctattgtggatccttagaggaccgccgctacctcaga
cacgaactcctcgatgacaagactgaatacaacgtcattgtgaccacatataacatggcc
ataggaaacgataacgaccgcggtgtgttccgtaaactgcgtctgaaatatgcattgttt
gatgaaggtcacatgctgaagaacatgaactctcttcgataccgccaccttatgtctatt
aatgcagaacatcgcatgctgctgactggaactcctctacagaacaacctcttggagctc
atgtctcttctgaacttcatcatgccttccttgttctccagctccactcaccagctctcc
aaaatgttttcaatgaaatcccatgaggagcagagccgctttgaaagggaccgtatttct
caggctaaactcatcatgaaaccttttatcctccgaagagtcaagagcgaggtcctcaag
cagctgccagccaaggtggagaaggtcgaggcctgcccaatgagtgagaagcagcaggtt
ctctaccagaacatgttcaaaaaactcaagactaccattataggagagaggcgcgagttg
tgtaatgtgatgatgcaattgaggaaaatggccaaccaccctctgcttcatagacaatac
tacaccacagaaaagctcaaagcaatgagcaaactcatgctcaaggagccaactcacttc
gatgcaaacgctgttctgatccaggaggacatggaagcgatgtcagactttgagctacat
ctgctgtgcaagcagttctcctccatcggctcttaccagcttgaaactgaactcctgctt
gactcagggaaatttcaccacctcacagagctgctcgcctcacataaaaacaagggtgac
cgagtggtattattcagtcagttcaccatgatgctggatattgtcgaggtgctgatgcga
catcttaagcatcgttatgtcagactggatggatccacacccatagccgacaggattggg
ttgattgatgagtacaacacggatcctgacatatttgtgttcctgttgtcaacacgtgct
ggtggcctgggcatcaacctcacatccgctaatattgtcatcctacatgacattgactgc
aatccctacaatgacaaacaggcagaggacagatgtcaccgtgtaggccagaccaagact
gtacaggtgacgaagctgatcagcaaggacagcatagaggccatcatgctgcagctgggc
cagaagaaactgaagctggaacaggacatgaccgctgctgaaggtggtgaggggaccata
ccagaagatatggcgtctttgctcaaagcctcactgggactgtga
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integrated database retrieval system
