Trematomus bernacchii (emerald rockcod): 117472836 Help Entry 117472836         CDS       T09643                                  Name (RefSeq) protein HIRA isoform X1   KO K11293   protein HIRA/HIR1 Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:tben03036]     117472836 Chromosome and associated proteins [BR:tben03036]  Eukaryotic type   Nucleosome assembly factors    Histone chaperones     Other Histone chaperones and regulators      117472836 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hira Beta-prop_CAF1B_HIR1 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N ANAPC4_WD40 EIF3I WDR55 Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th HIRA_B Beta-prop_EIPR1 WD40_like Motif Other DBs NCBI-GeneID:  117472836 NCBI-ProteinID:  XP_033974149 LinkDB All DBs Position Unknown AA seq 1019 aa AA seqDB search MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNENIP KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPTPEMVTCLRGHTGLVK GLTWDPVGKYIASQADDHSLRVWRTMDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLV SAHAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSAQKPGCPYC CCAVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFS LDELGDPLNEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSIQANSG PGSAGPESSAPKLNSMMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSP ALFNSAPILPSGSSMSNQLTSQLSSDSSPGQASSLGLRPIHDPMLTSPPPNSATKGLEDG LKSSLLLTSASKIEPMKALDSRFTERSKATTGVTAVISSISGLMPLDSRPKDGLSALKDL KNKDDTSSDSEDKMASINKNLMLGKRKPELLIDVGEVVEKRKKGRPRKDKMAAPTAQPFT QMTHTAEREPSRVAAPPPPVAALKLPTPSIKKTFSLQVSMEPSMFLEVENEVSVVAGSKL SQLRCSRDGRDWNTLLPSSVVTAAGSSDILAVACQDRMLSVFSSCGRRLLPAIQLATPVS ALHCSGHFVMALTAGAALSVWDVHKQKALVKNESLLSILPGADTTVSQSLLTQQGVPVVG LSNGKSYCFSSSLETWTLIADKGDSMVQCADFRSCLPTQDAPVSSGPLAVMQGRNLNAGR LASRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYTRFLVNEGSEFRLREL CKELLGPVHKSAATAWEPTTLGLRKRELLREVLPVIVENLRFQRLFTEYQDQLELLRNK NT seq 3060 nt NT seq  +upstreamnt  +downstreamnt atgaagctgctgaagccgagctgggtgagccacaacggcaagcccatattttctgttgac atccaccctgatgggacaaaatttgcaaccgggggccaaggagaggattcgggcaaggtg atgatctggaacatggcgccagtcctcagagaggaggatgagaagaatgagaatattccc aaaatgctttgccagatggacaatcacctagcttgtgtgaactgtgtgcgctggtccaac aacgggctgtacctggcatcaggaggagacgacaagctggtcatggtgtggaagagagct gcattcattggtccgagcacagtgttcgggtcgagcagtaagctggccaacgtggagcag tggaggtgtgtcaccatcctgaggaaccacactggagatgtgatggacgtggcgtggtct cctcatgacgtgtggctggcctcctgcagcgtggacaacaccatcgtcatctggaacgct cgcaaatttccaactccagagatggtgacatgtctgcgaggacacactgggctggttaaa ggtctgacgtgggacccggtggggaaatacatcgcctcccaggccgacgaccacagcctc agagtgtggaggacaatggactggcagatggaggccaacatcaccaaacccttcagcgag tgtggtgggacgacccacgtcctgcgtctgtcctggtctccagacggtcagtatctggtg tcagctcacgccatgaacaactccggtcccaccgctcagatcgtggagagagatggctgg aaaacgaatatggacttcgtcggccaccgtaaagctgtcacagtggtgaaatttaaccca aagatctttaagaagaagcagaagaacggcagcgctcaaaaacccgggtgtccgtactgc tgctgcgccgtcggcagcaaagaccggtcgctctccgtctggctgacctctctgaagcgc cctctggtggtcatccatgatctgtttgataaatcgattatggacatatcctggactctg acaggtctggggatgttggtgtgttcgatggacggcactgtggcctacctggacttctca ctggatgaactgggagacccgctaaacgaggaggagaagaacagcatccatcagaacatc tacggtaagagtctggctataaccagcacagaggctcagctctccaccaccatcatcgag aaccctgagatgctcaaataccagcaggagcgccagaactcaatccaggccaactcggga ccgggcagcgccgggccagaatcctcggcccctaaactcaacagcatgatgaacggagag tctctcgaggacatcaggaagaacctcctgaagaaacaggttgagacgagaactgcagac ggacgaagacgaatcacaccgctctgcattgctcagctggacaccggggatttctctccc gctctgttcaacagcgctcccatcctgccgtcgggctcctccatgtccaaccagctcacc tcccagctcagctcagactccagcccaggacaggcctcttctctggggcttcggcccatc cacgaccccatgctcacctcgcctccacccaacagcgccacaaagggcctggaggacggt ctgaagtccagtctgctgctcacttctgcctccaagatcgagccgatgaaagctttggac tcaaggttcacagagaggtcaaaggccacaacgggggtcacagccgtcatctcctccatc tctggactcatgccgctggacagcaggcccaaagacggcctctccgctctgaaagacttg aaaaacaaagacgacaccagcagcgacagcgaagacaaaatggcctcgatcaacaaaaac ctgatgttgggcaagaggaaacccgagctgctgatagatgtaggagaggtggtggagaag aggaagaagggacggcccaggaaagacaagatggctgcacccaccgcccaaccattcact cagatgactcacacagcagagcgggagccaagcagggtggcagctcctccacctcctgta gctgctctcaaactgccaacacccagtataaagaagaccttcagtctgcaggtaagcatg gagccatctatgttcctggaggtggagaacgaggtgtctgtagttgcgggttcaaagctc agccagctgcgatgctccagagacggacgggactggaacacactgctgcccagctcagtg gtcactgctgcagggagcagtgacatcctcgccgttgcctgtcaggacaggatgttgtca gtgttctcttcctgtgggcggcggctccttcctgccattcagctggccacgcctgtgtca gctctgcactgctcgggccactttgtcatggctctgacggctggggctgcgctgtcggtc tgggatgttcataaacaaaaggctctggtgaagaacgagtctctgctgagcattttacca ggtgctgacaccacagtgtctcagtctctgctgacccagcagggcgttccagtcgttgga ctctccaacggaaagtcctactgcttcagctcctcactggagacatggacgttaatagcg gataaaggagactctatggtccagtgtgctgacttcaggagctgcctacctacccaggat gcacctgtgtcctcagggccactggctgtcatgcagggacgcaacctcaatgctggtcgg ctggcgtcccgcctctcctccacccctcaccaccttcagcagagcatgacgttggccttc ctggagaatcagctggcatctgctctgactttgcagtcagcacaggagtatcgctactgg ctgctcatctacacccgtttccttgtcaacgaaggttcagagtttcgtctccgagaactc tgcaaggagctgctcggtcccgtccacaaatcagcagcgacagcctgggagcccaccact ctgggtctacgtaagcgcgagttgttgcgggaagtcttacctgtcatcgttgaaaacctg cgattccagagactgttcaccgaataccaggaccagctggagctactgcgcaacaaataa

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