Trematomus bernacchii (emerald rockcod): 117472841
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Entry
117472841 CDS
T09643
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117472841 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tben01007
]
117472841 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tben03016
]
117472841 (tars1)
Enzymes [BR:
tben01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117472841 (tars1)
Amino acid related enzymes [BR:
tben01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117472841 (tars1)
Transfer RNA biogenesis [BR:
tben03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117472841 (tars1)
Prokaryotic type
117472841 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117472841
NCBI-ProteinID:
XP_033974157
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MADQAVVEKMSEMQVDEKKKGATEGGKDGGKKKAKNAAGQSAGRAELTPAPEYIDERLSL
YTKLKAEHDALMAERAAKDSRAIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIA
KVNNGVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHILGEAMEKVYGGCLCYGPPIE
SGFYYDMFLESTADGVSSNDFPGLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCR
ILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIY
GISFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNSLIE
FIQSEYRKRGFQEVMTPNIYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCL
MFDHRPRSWRELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKG
CLDFLRTVYNVFGFSFKLNLSTRPEKYLGEPEVWEQAEKQLENSLNEFGEKWILNPGDGA
FYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVGHDSDDKKRPVIIHRAILGSVE
RMIAILTENYGGKWPLWLSPNQVMVVPVGPTCEEYAQKVKQEFHSNGFMSEVDLDPGCTL
NKKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERTVEECIERLQQLKTCKSRN
AEEDF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaggctgtcgtggagaaaatgagcgagatgcaagtggacgagaaaaaaaag
ggggcgactgaaggcggtaaagatggaggaaagaaaaaggctaaaaatgctgctgggcaa
tctgcaggcagggccgagctgacaccagcccctgagtacatagacgagcgtctttctttg
tacaccaagctgaaagccgagcatgacgctctgatggctgagagggctgcgaaggacagc
cgggccatcaaggtgactctgcctgatgggaaggtggtggacgccgaatcctggaagact
acaccataccaggtggcctgtggaatcagtcaaggccttgctgacaacacagtgattgct
aaagtgaataacggtgtgtgggatctggaccgaccattggaggaggactgcagccttcag
ttgctgaagtttgatgatgaggaggctcaagctgtttactggcactccagcgcacatatc
ctgggtgaagccatggagaaggtgtatggaggctgcctgtgctacggcccccccatcgag
agcggcttctactacgacatgttcttggagagcactgctgatggtgtttcaagcaatgac
ttcccaggactggagaccttgtgcaagaaaattatcaaggagaagcagccctttgaaagg
ctggagataaagaaggaaactctgttggaaatgttcaagtacaacaagttcaagtgccgc
attctcaatgagaaggtgaccactcccaccaccacagtgtacaggtgtggtcccctgatt
gacttgtgtcgcgggcctcatgtgagacatacagggaaaatcaaggcccttaagatccac
aagaattcgtctacatactgggagggtaaggcggacatggaaaccctccagaggatctac
ggaatctccttccctgaccccaaaatgctcaaagaatgggagaagtttcaagaggaagcc
aagaacagagatcaccgcaaactgggccgggagcaagacttgttcttcttccatgacctg
agtccagggagctgcttcttcctgcctaagggggccttcatctacaacagcctgattgag
ttcatccaaagtgagtacaggaagaggggtttccaggaggtgatgacgcccaacatctac
aacagtaagctgtggcagacctccggccactggcagcactatagcgagaacatgttctcc
ttcgaggtggagaaggagaccttcgccctcaaacccatgaactgcccgggacactgtctg
atgttcgatcaccggccacgctcctggagagagcttccaattcgcatggccgacttcggc
gtgctgcacaggaacgagctgtcaggcgcgctgacaggcctcacccgggtccgccgcttc
cagcaggatgatgctcatatcttctgcaccatggaccagattgaggaagagatcaaaggc
tgcctggacttcctgcgcactgtgtacaacgtgtttggcttctctttcaaactcaacctc
tccacaagaccagagaagtacctgggagagccggaggtctgggaacaagcagaaaagcaa
ctggagaacagcttgaatgaatttggggagaaatggattctgaaccccggtgatggagct
ttttatggaccaaagattgacattcagatcaaggatgccatcggccgctaccatcagtgt
gccacaattcagctggacttccagctgccgatccgcttcaacctcacctacgtcggccat
gatagtgacgacaagaagagaccagtgatcatccacagagctatcctgggatcagttgag
aggatgatcgccattctgactgaaaactacggcggaaaatggcctctgtggctctctcct
aaccaggtgatggtggtgcctgtgggaccgacctgtgaggagtacgctcagaaggtgaag
caggagttccacagcaacggcttcatgtctgaggtggacctggaccccggctgcactctg
aacaagaagatcagaaacgctcagttggcgcagtacaacttcatcctggtggtgggagag
aaggagaagacgagcaacactgtaaatgtgcgcacccgggacaacaaagtgcacggcgag
cgcactgtggaggagtgcatcgagcgtctgcagcagctgaagacctgcaagagccggaac
gctgaggaggacttctga
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