Trematomus bernacchii (emerald rockcod): 117472852
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Entry
117472852 CDS
T09643
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tben04054
]
117472852
Pattern recognition receptors [BR:
tben04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117472852
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
117472852
NCBI-ProteinID:
XP_033974174
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
METTDPKIHHEGPDSPGPGPSCVSMKSDRSMPRPITFKAGEHDDSPEIHHERPDSPGPSC
LSMRSDSSMPRPIKFGDGEHSDGPRGHQQRSEGPGGQSAQQHQTHLDSIFMLLEDHIVTF
VKNELKKIQTVLTSDYPECLESQREDEEVLDGEDEEQRRSSREAFLNISLHFLRSMKQVE
LAERLQSRTAAAVCRRNLKSTLKERFQCVFEGIAKAGNPTLLNQIYTELYITEGGSAEVN
EEHEVRQIETASRKPHRPETTIRQEDLFKASPGRDAPIRAVMTKGVAGIGKTVLTQKFTL
DWAEGKANQDILFIFPFTFRELNVVRENKYSLVELVHHFFTETRDAGICRFDQFSVVFIL
DGLDECRLPLDFLNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPE
CVDMVTEVRGFTDPQKEEYFRRRFRDQAQAGTIISHIKSSRSLHIMCHIPVFCWISATVL
EEVLETREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESRKMMESLGKLA
FEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFREERGLYQDKVFCFVHLSVQEFL
AALHVHLTFINSGVNLLADKQQPSYQRRKDYEGKLIRFYQSAVDKALQSPNGHLDLFLRF
LLGLSLQTNQKLLRGLLTQTESSSGTNQETVQYIKKKMDEDLSPERSINLFHCLNELNDH
SLVEQIQQSLSSGSLSTDSLSPAQWSALVFILLSSGEDLDVFDLKKYSASEEALLRLLPV
VKASRKALLSGCNLSEKSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKNLCAGLKSPHC
ELETIRLSGCNLSERSCEALSSVLSSKSCSLRELDLSNNDLQDSGVKKLSDGLQSPLCEL
ETLSLSGCLVTNKGCASLASALSSNPSHLRELDLSFNHPGDSGVNLLSVIQEDPHCRLDT
LRVDHGGEQRLKPGLMKYSCELTLDTNTAQRKLKLSDNNRTVTRVREKQPFPDHPERFDF
YPQLMCREALTGRCYWEVEWKGEVHISVTYRGIRRRGGSEDSQFGLNDQSWSLSCSDDGY
SVWHNERETSISSPSSPSSPSSPSSSSSSSPSSPSSPSSSSSGRVAVYLDHPAGFLSFYR
VSSDSLTHLHTFRTTFTEPLYAGFGLGLWSYHSSVSLCSL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccactgatccaaagatccaccatgagggaccagactctcctggacctggaccc
agctgtgtgtccatgaagagtgaccggtctatgcctcgacctattacgtttaaagctgga
gagcatgatgatagtccagagatccaccatgagagaccagactctcctggacccagctgt
ttgtccatgaggagtgactcgtctatgcctcgacctataaagtttggagatggagagcat
agtgatggaccaagaggtcatcagcagagatcagagggtcctggtggtcagtctgcccag
cagcatcaaactcacctggactccatatttatgctgctggaggaccacatcgtcactttt
gtaaagaacgagctgaagaagatccagacagtcctgacttcagattacccagaatgctta
gagagtcagagggaggatgaggaggtgttggatggtgaggatgaagagcagaggaggagc
agcagagaggcctttctgaacatctcactgcacttcctgaggagcatgaagcaggtggag
ctggctgagcgtctgcagagcagaactgctgctgcagtctgcagacgtaatctcaaatcc
accctgaaggagaggttccagtgtgtgtttgagggcattgctaaagcaggaaacccaacc
cttctgaaccagatctacacagagctctacatcacagagggggggtctgcagaggtcaat
gaggaacatgaggtcagacagattgaaacagcatccaggaaaccacacagaccagaaaca
accatcagacaagaagacctctttaaagcctcacctggaagagatgcaccaatcagagca
gtgatgacaaagggcgtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaaggcaaagccaaccaggacatcctgttcatatttccattcaccttcaga
gagctgaatgtggtgagagagaacaagtacagcttggtggaacttgttcatcacttcttc
actgaaaccagagacgcaggaatctgcaggtttgatcagttctcggttgtgttcatcttg
gacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgac
gtcacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaagctgctt
ccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgag
tgtgtggacatggtgacagaggtccgagggttcactgacccacagaaggaggagtacttc
aggaggagattcagagatcaggcgcaggccggcaccatcatctcccacatcaagagctca
cgaagcctccacatcatgtgccacatcccagtcttctgctggatctctgctacagttctg
gaggaggtgttggaaactagagagggaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtggttcagtccaaagtgaagaacatcaagtatgatggaggagctgag
acagatccacactggagtccagagagcaggaagatgatggagtctctggggaagctggct
tttgagcagctgcagaaaggcaacctgatcttctatgagtccgacctgacagagtgtggc
atcgatatcagagcagcctcagtgtactcaggagtgttcacacaggtctttagagaggag
agaggactgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctg
gctgctcttcatgtccatctgaccttcatcaactctggggtcaacctgttggcagataaa
caacaaccctcctaccaacggcgtaaagattatgagggcaaattaatacgtttctaccag
agtgctgtggacaaggccttacagagtccaaacggacacctggacttgttcctccgcttc
ctcctgggtctttcactgcagaccaatcagaaactcctacgaggcctgctgacacagaca
gaaagtagctcagggaccaaccaggaaacagtccagtacatcaagaagaagatggatgag
gatctgtctccggagagaagcatcaacctgttccactgtctgaatgaactgaatgatcat
tctctagtggagcagatccaacagtccttgagttcaggaagtctctccacagatagtctc
tctcctgctcagtggtcagctctggtcttcatcttactgtcatcaggagaggatctggac
gtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtg
gtcaaagcctccaggaaagctctgctgagtggctgtaacctgtcagagaaaagctgtgaa
gctctgtcctcagtcctcagctcccagtcctctagtctgagagagctggacctgagtaac
aacgacctgcaggattcaggagtgaagaacctgtgtgctggactgaagagtccacactgt
gaactggaaactattaggctgagcggctgtaacctgtcagagagaagctgtgaagctctg
tcctcagtcctcagctccaagtcctgtagtctgagagagctggacctgagtaacaacgac
ctgcaggattcaggagtgaagaagttgtctgatggactgcagagtccactctgtgaactg
gaaactctcagtctctcaggttgtctggtcacaaacaaaggctgtgcttctctggcttca
gctctgagctccaacccctctcatctgagagagctggacctgagcttcaatcatccagga
gactcaggagtgaatctgctgtctgttatacaggaggatcctcactgcagactggacact
ctcagagtggaccatggtggagagcagaggttaaaaccaggtctgatgaagtattcctgt
gaactcacactggacacaaacacagcacagagaaaactcaaactgtctgacaacaacagg
acggtgacacgtgtgagagagaagcagccatttcctgatcatccagagaggtttgacttc
tatcctcaactgatgtgcagagaagctctgactggtcggtgttactgggaggtcgagtgg
aaaggagaggttcatatatcagtgacttacagaggaatcaggaggagaggaggcagtgaa
gactctcagtttggattgaatgatcagtcctggagtctgagctgctctgatgatggttac
tctgtctggcacaatgagagagaaacaagcatctcctccccctcctccccctcctccccc
tcttctccctcctcctcctcctcctcctccccctcctccccctcctccccctcctcctcc
tcctctggtagagtagcagtgtatctggatcatcctgctggctttctctccttctacaga
gtctcctctgactcactgacccacctccacaccttcagaaccacattcactgaacctctg
tatgctgggtttgggcttgggctctggtcatatcactcctcagtgtctctgtgttctctg
tag
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integrated database retrieval system
