Trematomus bernacchii (emerald rockcod): 117472875
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Entry
117472875 CDS
T09643
Symbol
ncor2
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 2
KO
K06065
nuclear receptor co-repressor 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117472875 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117472875 (ncor2)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117472875 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
117472875
NCBI-ProteinID:
XP_033974200
LinkDB
All DBs
Position
Unknown
AA seq
2429 aa
AA seq
DB search
MSSHPQSGPPGRRTVDTRHLPNPASLPLQLQRAHTEVGLVDYHSHHARDYSSHLSQPHRR
RPSLLSEFQPGNERGQEQHIRYEHIYLPEPSNQSEVEYAEIKRPRLEMGPESLMRPSSHR
PQLPMGGAEDMSKDRGSSMGKLEPISPVSPVHMDPDLDLVPARFSKEELIQNMDRVDREI
TMVEQQICKLRKKEHQLEEEAAKPHEPERTVSPPPSEAKHRSLVQIIYDENRKKAEEAHR
VLEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYD
QLMEAWEKKVDRIESNPRRRAKEGKVREYYEKQFPEIRKQRELQERMQSRVGQRGGGLAS
SAARSEHEVSEIIDGISEHENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPMKVY
KDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNENYKNIV
RRNYRRRGRSQHGQQQQQQQQQQLQQQQQQQQQVHRGIQEEKEKEKEEKEKEGERDEEKN
EAEDKEDGMKDDTSGEDAEDKEPTVAVKGRRTANSQGRRKGRITRSMTSEVEETTTPPLN
SELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQK
LDEILQQHKMKSEKERKARRRGKALQNEETSAPYTAEEEEMEGSGASGNEEEAPEDGEGG
ANNSSDTESLPSPHSSEDSKAKEEGSSRSKSSSNAEDKEASGSDMGQAGDEKPPVKEDAE
SAIKQEIKTETGETNKEPTPPSDAIDQKPPTAETEEGKSSSKSSKKDHGPKMGSHADSDS
SATCSADEVEETDNPDKNRITSPRPSLLNYSHDGVISSPLQKPLDLKQLKQRAAAIPPIL
PEAALQAIQRSGGKSLLPPHALALYQQQITMAHGESSQEVKMQQQLSGQPGKQQPYTMQS
ERDREALHSISPRMRPRSPSTSDKDELEGNERWLLTLLQGLKKSRSFSPHGEVKKQAMGP
DDLRTSNMGRPVLSPYPMSPRDMVKISHDQHLLHFNSFQQTGHPSLPNLPQDSGRLAAMR
PLTMPDPPPLISSSKPGGSITQGTPVQLHSPAHGLDHGKMTPTQMGLSWMDQRKVGGPFP
VIKQEQLSPRSSSSQADNMSTQGSPHDGASGRGSIPAVQGGSITKGIPGTRMHQDSPISY
RGGSITQGTPADVLYKGTITRLISEDSACRAERERDEAISKGHVVYEGISGHILTYDRPP
SQSIKDEGRGPGQSAELLGLKRPYDIMEGGISRGLPMRDSLSAATCEGLIGRAMPHDRDS
PHHQHYKDAHHIRGSISQGIPRHLDSQDGYLRREAKQMKRENSPPRGPGSLSDPMKGSMV
PTVKEAGRSIHLIPREPGKEGIIAQGTPMKQEPSGSGKRHDVRSIIASSPRSYHNPASHL
EMRAERGRYEEAPKGRPSAVVSTASSIARSSPLTLGSEQGGKSHHSPGGYEDKAALRAPY
PGPSHRGSPLSREASQRQHDGSSKNPTQERKSTPTPREMNATKSPLQGVPDQQTYERLLQ
GLGAADVYRQIPIAFDPASLPRGIPIDPAAYYLPRHLAPNPAYPHPYPYLIRGFPDTTAL
ENRQTLLNDYITSQQMHQWPAAAAMAAQRSDLLRGLTPRDQPLQMPYSQAPRGIIDLSQV
PHLPVLVPPSAGAAGGPMDRITYIPGGAASFPGRPYTTSPISPVGSVHMNKMQGASSERE
RERDRERDRERERERDRERDRERDRERERERDRERERDRERERDRDRDREKGGSMGNVEH
APIWRPGTEHSLASSSSCSVRPSSQPYSHQHSPVSPRTQDNVQQRPSVLHNTGGKSLSVS
DHSGSSVFRSMSSGSARYQGYPGHLQRTGVPPEAYQPAMDSGVAKEQSRDGGKNRGGLPK
HMQDQHGPSSKSDPKLSSPGGMYPGSYSSPSGRPQHLLPHQSDNPPGRGESGTPSREKTQ
NKAMSIQEQELRALGKTTMTAANFINAVIMRQISCETGMAETGSLVASSATDAQQNMETH
GLYRPPSEERLSPGQQPSSPSVKGSQRVVTLAQHISEVITKDYTRQSQQQSYHGSPVLDL
TRPPSASQLPPTSQESAQGSRYQEAHCGERNRDRSPQPKTSPISVCNDGIEPVSPAGASS
EPEVQGGASYSSEQGEQGMGSRSPPNTSQPPAFFSKLTESTSDIVRSKKQEMIKKMTVVG
NDGDFNAGQPGTEIFNMPASTNAGPVAPRPHPASEQPGNSIGLEAIIRKALMGKYDDQPE
ERSPSNLMGSGGVPAADGRGEDFFSQGGGKSSKGSGRSNGRKAKSPGPGLSGGERPSSVS
SVHSEGDCNRRTPLTNRVWEDRPSSTGSTPTPFPCNPLIMRFPSGTVSAPSPSSGQLGGP
VPGPGQGRSWEEEPKPLLMSQYETLSDSE
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcatccccagtctgggccgccgggccggaggactgtggacacacggcacctc
ccaaaccctgccagtctaccactacagctgcaacgggcacacacggaagtgggactagtt
gactaccactctcatcatgccagggactacagctcccacctgtcccagccccatcgccgc
cggccctccttactctctgagtttcagcccgggaatgagagaggacaagagcagcatatt
cgctatgagcacatttacctgccagagcctagcaaccaatcagaggtggagtatgcagag
atcaaacgacctcgcttggagatgggaccggagtctctgatgaggccttcatcccatcgc
ccacaattacccatgggaggggctgaggatatgtcaaaggaccgtgggagttccatgggg
aagctggagccgatctcccctgtgagcccggtccatatggaccccgacttggatctggtg
ccagctcggttctccaaggaggagctgatccagaatatggaccgcgtggacagggagatc
accatggtggagcagcagatctgcaagcttcgcaagaaagagcaccagctggaggaggag
gctgcaaagccacacgagccagagcggacggtctcaccgccacccagcgaggccaagcac
cgcagcctggtgcagatcatctacgatgagaacaggaaaaaggcagaagaggctcacagg
gtactggagggactgggacccagggtagaactgcctctgtacaatcagccttctgatacc
aagcagtaccatgagaacatcaaaataaaccaggcgatgaggaagaagctcatcttgtac
ttcaagaggagaaatcatgctcgtaagcagtgggaacagaaattttgccagcgctatgac
cagctgatggaagcctgggagaagaaggtggatcgcattgaaagcaacccgcggcgccga
gccaaggagggcaaggtgcgcgagtactacgagaaacagttcccagagatccgcaagcag
agagagctacaggagcgcatgcagagccgtgttgggcagagaggaggtgggctggcctcg
tctgcagctcgcagtgagcatgaggtctccgagatcatcgatggaatatcagagcatgag
aacactgagaagcagatgcggcagctggcggtgatcccccccatgctgtttgatgccgag
cagcagcgcatcaagttcatcaacatgaacggattgatggatgaccccatgaaggtgtac
aaggaccggcaggttatgaacatgtggagcgagcaggagaaggacactttcagagagaag
ttcatccagcatcctaaaaactttggtctgattgcatcttttctggagagaaagacggtg
gcggagtgtgtgctcttttactacctgaccaaaaagaatgagaactataagaacatagtg
cggaggaactacagacgccgaggaagaagccagcacggccagcagcagcagcagcagcag
cagcagcagctgcaacaacagcaacaacagcaacaacaagtgcaccggggcatccaggaa
gaaaaggagaaggagaaggaggagaaagagaaggagggggagagggatgaagaaaaaaat
gaagctgaagacaaggaggatggaatgaaggacgacacctctggagaagatgcagaggac
aaagagccgactgtggctgtcaagggtcgacgcacagccaacagccaggggcgccgcaag
ggccgcatcacccgctccatgaccagcgaagtggaggagacgaccacaccgccactcaac
agtgagctggccaatctggaaatgaatgagagctctcgctggactgaagaagaaatggaa
actgccaaaaaaggccttctccagtatggtaggaattggtccgccatcgccaagatggtg
gggtcaaaaaccgtgtcacagtgcaagaacttctactttaactacaagaagaggcagaaa
ctggatgagattctgcagcagcataaaatgaaatcggagaaagagcgaaaggcccgccgt
aggggcaaagccctgcagaatgaggagaccagtgccccgtacacagcagaggaggaggag
atggagggctcaggtgccagtggcaatgaagaggaggcccctgaagatggagaaggtggt
gctaacaacagctctgacacggagagcttgccctcgccacactcatcagaggacagcaag
gctaaagaggaaggctcgagcaggtcgaagtccagctccaacgcagaggacaaggaggcg
tccgggtccgacatgggccaggcaggggatgagaaacctccggtcaaggaagatgcagaa
tcagccatcaagcaagagataaagactgagacaggggagaccaacaaagagccaacgcca
cccagcgatgccatagatcaaaaacctcctactgcagagacagaggaaggaaagagctcc
tctaagagctccaaaaaggaccatgggcctaaaatgggttcccatgcggacagtgactct
agtgccacttgcagcgctgatgaagtggaggagactgacaacccagacaagaatagaatc
acttctccacggccaagtctactgaactactctcatgatggagtgatatcgtcccctctg
cagaagcccttggacctgaaacagctcaaacagagggctgctgctataccacccattttg
ccagaagccgccttgcaggccattcagcggagtggtggcaagtcactgctgcccccccac
gccctggcattgtaccagcagcagatcaccatggctcacggggagtcctctcaggaggtc
aaaatgcagcagcagctctcaggccagcccggcaaacagcagccgtacaccatgcagtcg
gagagagacagagaggctcttcacagcatcagtcctcgcatgcgcccccgcagcccctcc
accagcgacaaggatgagctggaaggcaacgagaggtggttactgaccctcctgcaggga
ttaaaaaaatcccggtctttctctccgcacggtgaagttaagaagcaggcgatgggcccc
gacgacctgaggacctccaacatgggtcgtccggttctctccccctatcccatgtcccca
cgagacatggtcaagatcagtcacgaccagcacctgctccacttcaactcgttccagcaa
acaggccacccctcactgcctaatctgccacaggacagtggaaggctagcagcaatgaga
cccctcacgatgcctgatccccctcctcttatttcctcctccaagccaggaggctccatc
acacagggcactccagtgcagctgcacagccctgctcatgggctggaccacgggaagatg
acccccacacagatggggttgtcttggatggatcagaggaaagtgggcggtcctttcccc
gtgataaagcaggaacagttgtctcctcgcagctcttcctctcaagctgacaacatgtca
acccaggggtcgcctcacgatggtgcctctggacgtggttctattccagcagttcagggt
ggtagtatcactaagggcatcccagggaccagaatgcatcaggattccccaatctcctac
cgagggggatccattactcaggggacaccggctgatgtgctgtataagggaaccattacc
cgtctgatcagtgaggacagcgcctgccgagctgagagggaacgggatgaggcgatatct
aaaggccatgtggtttacgagggtatcagtggacacattctcacatatgaccgcccacct
tctcagagcattaaagatgaaggcagaggccccgggcaatctgcagaacttctgggtctg
aagcgtccttatgacattatggagggaggcatctccagaggactgcctatgagggattca
ctgtctgctgccacctgtgaaggtctgattggtcgagccatgcctcatgacagggacagt
ccacaccaccaacattacaaagatgctcatcacatccgtggctcaatctcacaaggtata
cctcgtcatctagactctcaggatggctacctgaggagagaagctaagcagatgaagaga
gagaactccccaccccgcgggcccgggtctctttcggacccaatgaagggctccatggtg
ccgacagtgaaggaggcagggcgctccatccacctcattcccagggagcctggcaaggag
ggcatcatagcacagggaacacccatgaagcaggagccatccggttcagggaagcgtcac
gatgtccgctccatcatagccagttcaccacgttcctaccacaacccagcctcacacctg
gagatgcgggctgaaaggggccgctacgaagaggcgccaaaaggccggcccagcgccgtt
gtcagtacagctagcagtatcgctcgctcttctccccttaccctggggtcagagcaggga
ggcaagtcccatcatagtccagggggctacgaggacaaagccgccttaagggccccttac
cccgggccttcgcaccgtggctcccctctgtccagggaggcaagccaaaggcaacatgat
ggttcaagtaagaatccgacgcaggagcgcaaatccacaccgacccccagagagatgaat
gccaccaaatcaccgctccaaggtgttccagatcagcagacctacgagcgcctgctgcag
ggtctaggtgctgcagacgtgtaccgtcaaatccccatagccttcgaccctgcatcgctg
ccccggggcatccccattgacccagcggcctactacttgcctcgccacctagcgcccaac
ccagcgtaccctcacccctacccctacctcatccgtggctttcccgacacaacggccctg
gagaaccgccagacgctgctcaacgactacatcacctcgcagcagatgcaccagtggcct
gcagcggctgccatggccgcccagcgctctgacctgctgaggggcctcacccctcgagac
cagccccttcagatgccctactctcaagccccacgtggaatcatcgatctttctcaggtg
ccacacttacctgtcctggtccctccctctgcaggggccgccggcggcccaatggatcgc
atcacctacatccccgggggagcagcctccttccctggcaggccttacaccacctccccc
atctcacctgttggctccgtgcacatgaacaagatgcaaggcgcatcttcagagcgggag
cgcgagagagaccgtgagcgtgacagagagagggagagagagagggaccgggaacgcgac
cgagagagagatcgggaaagagagcgggagagagaccgagagagggaaagggaccgggag
agagaaagggacagagaccgggaccgagagaagggcgggtctatggggaatgtggagcac
gcgcccatctggagaccaggtacagagcacagcttggccagcagtagcagctgcagtgtg
agaccctcctcccaaccgtacagccaccagcactcccccgtgtcccctcgcacccaggac
aacgtgcagcagaggccgagcgtcctgcacaacaccgggggcaagagtctttctgtcagc
gaccactccggctcctctgtgtttcggtccatgtcctccgggtcggcccgctaccaaggt
taccctggccacctccagaggacaggtgtcccccctgaggcctaccaacctgccatggac
tcgggtgtagccaaagagcagagtcgcgatggaggcaaaaacaggggtggtctacccaag
cacatgcaggaccagcacgggccctccagtaaatctgaccccaaactgtccagcccagga
gggatgtaccccgggtcctacagctcgccttcaggccggccccagcacctgctgcctcac
cagtcggataacccccccggccgcggagaaagtggtacacctagtagggaaaagactcaa
aacaaagcgatgtccattcaggaacaagagctccgagcactcggtaagaccaccatgact
gcagccaacttcataaacgcggttattatgcgtcaaatttcttgtgaaacggggatggca
gagacgggctcccttgttgccagcagcgccactgatgctcaacagaatatggagacacac
ggtctgtaccgtcccccgtctgaggagagactgtctccgggccagcagccctcctccccc
agtgttaaaggcagccagcgggtggtcaccctggcacagcacatcagtgaggtgataact
aaagactacaccaggcagagccagcagcagagctaccacggctctcctgtcctggacctc
acccgcccccccagtgcctcccagctcccccccacctcacaagagtcggcccaagggtcc
cgatatcaagaggcccactgtggagaacgcaacagagacaggtctcctcagcccaagact
tcccccatcagtgtttgtaacgatggcatcgagccggtgtctcctgctggagccagctct
gaacctgaagtccagggaggggcgtcgtactccagcgagcagggggagcaaggaatgggc
tcccgctcccctccgaacacctcgcagcctccggctttcttcagcaagttgaccgagagc
acctcggatattgtgaggtcaaagaaacaggagatgattaagaagatgacggtggtggga
aatgacggtgatttcaatgctggtcaaccaggaacagaaatcttcaatatgccagcgtca
acaaatgcaggacctgtggctccccgcccccatccagcttcagagcaacccggtaactcc
ataggcctggaggccattataagaaaggccttaatgggcaaatatgacgatcagcctgag
gaacgctctccctccaacctgatgggctcggggggggtgcctgcagccgacggacgtggt
gaagacttcttctcacaaggtggtggaaagtcctcaaagggcagcgggcgctctaatggg
cgcaaggctaaatctccaggaccgggtctgtcggggggggagagaccctcctccgtgtcc
tcagtccactctgagggagactgcaaccgaaggactcctctaaccaaccgcgtgtgggag
gatcggccttcatccacaggttcgactccaactcccttcccctgtaatccgttgataatg
cgtttccccagcgggacagtgtccgccccctccccctcctctggtcagctggggggcccg
gtaccggggcctggacagggccgctcctgggaggaggagcccaagcctctgctcatgtct
cagtacgagaccctgtctgacagcgagtga
DBGET
integrated database retrieval system
