Trematomus bernacchii (emerald rockcod): 117472876
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Entry
117472876 CDS
T09643
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117472876 (pax1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117472876 (pax1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
117472876
NCBI-ProteinID:
XP_033974233
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MEQNYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQGSAQAGLSYNHIYPYSYPNAMSPTSAKMGNHPGVP
MTAGHMSISRAWPSAHTVSNILGIRAFMDSSAIAGTDGYAQKMEDWSCVNRAAFPAAHSV
NGIDKTAIDADIKYAQPSSALSGYVSACAYSPSNQYGVYSGAAGGYVAPGHHHWQPQSPA
LSHPGGGMGMHAGEIHSPMNFKHQAREGDRKQPTPLSKQQQQQQQLQLQQQHEDLNSVHG
LSLPTSSS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaactatggagaggtgaaccagctcggcggtgtgttcgtcaatgggcgaccc
ctgcccaatgccatacggctaagaatagtggagttggcccagctggggataagaccctgc
gatataagccggcaactccgagtctcccacggctgcgtgagcaagattctggcgaggtac
aacgagacgggttccatcttacccggtgccatcggtggaagcaaaccgagagtcacgacg
ccgaacgtggtgaaaaatatcagggattacaaacaaggagaccccgggatctttgcatgg
gagatccgggacaggcttttggcagatggagtttgtgacaagtacaatgtcccgtcggtt
agctcgatcagcaggattttacgcaacaagattggaaatctctcccagcccaaccagtat
gagagcagtaaacaaggctccgcgcaggccgggctctcctacaaccacatttacccgtat
tcctaccccaacgccatgtcgcccactagcgctaaaatgggcaaccatcctggagtaccg
atgacggctggacatatgagcatatcccgggcctggccctcagcacacaccgtcagcaac
atcctcggtatacgagcctttatggattcttcagccattgctgggacggacggatatgca
cagaaaatggaggactggagctgcgtcaacagagcagctttccccgcggctcactctgtc
aacgggattgacaaaacagccattgacgctgacataaaatacgctcagccttcctccgca
ctgtccggttatgtctccgcgtgtgcgtactctccctccaaccagtacggggtgtacagc
ggggcagcaggcggatacgtggccccgggacaccaccactggcagccgcagagcccggcc
ctgtcgcacccaggcggcgggatgggcatgcacgcgggggagatccactcaccgatgaac
ttcaagcaccaggcccgagaaggagacagaaaacagcccactcccctgagcaagcagcag
cagcagcagcagcagctgcagctgcagcagcaacacgaagacttgaacagtgtgcatgga
ctcagtctccctacctcatcatcataa
DBGET
integrated database retrieval system
