Trematomus bernacchii (emerald rockcod): 117472890
Help
Entry
117472890 CDS
T09643
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117472890 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117472890 (ppil2)
03110 Chaperones and folding catalysts [BR:
tben03110
]
117472890 (ppil2)
04121 Ubiquitin system [BR:
tben04121
]
117472890 (ppil2)
Enzymes [BR:
tben01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117472890 (ppil2)
Spliceosome [BR:
tben03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117472890 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
117472890 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
117472890 (ppil2)
Chaperones and folding catalysts [BR:
tben03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117472890 (ppil2)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
U-box type E3
117472890 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
117472890
NCBI-ProteinID:
XP_033974219
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTHFYGGKKSEIPQANFRRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIIPWIKRYGTNPISGEKLEVKSLIKLTIAKNTDGKYHCPVLYNVFTNNSHIVTNK
VSGNVFSNEAVEQLNIKTKSFKDLLTDEPFTRKDIIVLQDPTNLDKFNVSDFFHVKNNLK
LLDPDEEKAKLHPSYHLKTTNMETRETLAELYKDYKGDALLASTMKEPVDKKTDKLNAAH
YSTGRVSASFTSTAMTPATTHVADAIADDTVRYQYVKKKGYVRLHTNKGDLNLELNCDKV
PKAGENFIGLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDRKHTIFGRIVGGFEALTAMENVESDPKSD
KPKSEIKIITATVFVDPYEEADAQIAAERAQELQKQEDEREQTSIARKKAKGEEAPKTFK
AGVGKYINPATTKRPAAVDESGPSTSGAVPKKSKGKTNLGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaagataaaatgtacatcacatgttctgagtacacacac
ttctatggagggaagaaatcagaaatcccacaagcaaacttcagaaggcttccatttgac
cactgcagcttgtccctgcagccgtttgagtatcctgtttgtactgaggagggggtcgtc
tttgacctgctgagcatcatcccgtggatcaagaggtatggcactaatccaatctctgga
gagaaactggaagtgaagtccctcatcaaacttacgatcgctaagaacaccgatggaaag
tatcactgccccgttctgtacaacgtcttcacaaataactctcacatcgtgaccaacaag
gtctccggcaatgtgttctccaatgaggctgttgagcaactcaacatcaagaccaaaagt
tttaaagacctgctgaccgacgaacccttcaccagaaaggacatcatagtacttcaggac
ccaacaaacctggataagtttaacgtgtccgacttcttccacgtgaaaaacaacctgaag
ttgttggatcccgatgaagaaaaggccaagctgcacccgtcctaccacctgaaaaccacc
aacatggagaccagggagaccttagcggagctgtacaaagactacaagggggacgcgctc
ctggcttccactatgaaggagccagtggacaagaagacagacaaactgaacgctgctcac
tactctacgggcagagtttctgcctccttcacatcaacagccatgactcctgcaacaaca
cacgtagcagatgccatcgcagatgacacggtgcgttaccagtatgtgaagaagaaaggc
tacgtccgtctgcacaccaacaagggagacctgaacctggagttgaattgtgataaggtt
cctaaagctggagagaacttcatcggtctgtgtaagaaaggctactatgatgggacagtc
ttccacaggtccatcaggaacttcatgattcaaggaggggaccccactggcaccggtaca
ggaggggaatccttctgggggaaacctttcaaggatgagtttcggcccaacctgtctcac
actggccgaggggttctcagcatggcaaactctggtccaaacaccaacaaatctcagttc
ttcattacgttccggtcgtgcgcctacctcgacaggaagcacacaatctttggaaggatt
gttggtggatttgaggcgcttacagccatggagaatgtggagagtgatcccaaatcagac
aaaccaaagtcggagatcaagatcataactgccactgtgtttgtggacccgtacgaagag
gctgacgctcagatcgcagcagagcgagcgcaggagctgcagaagcaggaggacgagagg
gagcagaccagcatcgcccggaagaaagccaagggggaagaggcgccgaagaccttcaaa
gcgggtgtggggaaatacatcaaccctgccaccacaaaacgaccggctgctgtagatgaa
agcgggccgtccaccagcggagcggtgcctaaaaagtccaagggcaagaccaacctcgga
gactttagctcctggtag
DBGET
integrated database retrieval system
