Trematomus bernacchii (emerald rockcod): 117472970
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Entry
117472970 CDS
T09643
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117472970 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117472970 (rorb)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117472970 (rorb)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117472970 (rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117472970
NCBI-ProteinID:
XP_033974326
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All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MTWGGEGSLSTSSGKSNTMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNA
AYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQA
RLLLERQQQTGEAEALARVYSTSLTNGLSTLNHEIGGTYANGHVIELPKGGHVNGAVVPG
GYYGIDSTQPSPDQSGLDMSGMKHIKQEPVYDLTPVPNLFSYSGYQDIQLGPNNVSMGEL
DRIAQNIIKSHLETCQYTTEELQQLAWQTHSYEEVKMFQGKPRDVLWQQCAIQITHAIQY
VVEFAKRISGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKA
LGCDDLVSAVFDFAKSLCALQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFAL
QHIMQKNHMDEDALAKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNP
DPNSGVMAMPK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacttggggaggggaggggagcctcagcactagctccggcaaatccaacaccatgcga
gcccaaatcgaggtcataccttgcaaaatctgtggagacaaatcatcaggtatccactac
ggagtcattacatgtgagggatgtaagggtttcttcagaaggagtcagcagaacaatgct
gcctactcctgcccccgccagaggaactgcctcatcgacagaacaaaccgcaaccgctgc
caacactgtcgcctgcagaaatgtctcgccctaggaatgtccagagatgcggtaaagttt
ggccgcatgtcaaagaagcagcgtgacagcctgtatgcagaggtgcagaagcaccaggct
cggctgctgttggagcggcagcagcagacaggcgaggcagaagcactcgcacgagtttac
tcgaccagcctaaccaacggactgtccacccttaaccatgagattgggggcacctatgcc
aatggtcacgtcattgagctgcccaagggtggccatgttaacggagccgtagtcccaggg
ggatactatgggatagactccacccagccgtctccggatcagtcagggctggacatgtcg
ggcatgaagcacattaagcaggagccggtgtatgacctgacgccggtgcccaacctgttc
agctatagcggctaccaggacattcagctgggacccaacaacgtcagcatgggagagctg
gaccgtattgctcagaatatcatcaagtctcacctggagacgtgtcagtacacaacagag
gagctgcagcagctagcctggcagacacactcctacgaagaggtcaaaatgttccagggc
aagccccgggacgtgctgtggcagcagtgtgccatccagatcacccatgccatccagtat
gtggtggagtttgcaaagcgcatctcggggttcatggagctgtgccagaacgaccagatc
ctcctgctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagggcattcaac
cctctcaacaacactgtgctctttgaagggaagtacggcggcatgcagatgttcaaagct
ctaggttgcgatgacttagtgagtgccgtgtttgactttgccaagagtttgtgtgcactg
cagctgacagaggaggagatcgctctgttctcggcagctgtactcatttccacagatcgg
ccttggttgatggagcctcggaaagtccagaagctccaggagaagatttactttgctctg
cagcacattatgcagaagaaccacatggacgaagatgcactggcaaagctgatcagccga
atcccaacgttgtcagccctgtgcacgctccacaccgaggagctccaggccttccagcag
ctccacccagaaacagtcaacgtcctcttccctccgctctacaaagaactgttcaaccct
gaccccaactctggggtcatggccatgcccaagtga
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