Trematomus bernacchii (emerald rockcod): 117472980
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Entry
117472980 CDS
T09643
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117472980 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117472980 (loxhd1b)
Cilium and associated proteins [BR:
tben03037
]
Other cilia and associated proteins
Stereociliary proteins
117472980 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Other domain-containing proteins
Others
117472980 (loxhd1b)
BRITE hierarchy
Motif
Pfam:
PLAT
Motif
Other DBs
NCBI-GeneID:
117472980
NCBI-ProteinID:
XP_033974340
EnsemblRapid:
ENSTBNG00005024257
LinkDB
All DBs
Position
Unknown
AA seq
2400 aa
AA seq
DB search
MPTKKKKTRQSGEEETKDVDDEGSEDQEPKPKKKSKQASEYAGRLKKKKKKKKLEDSDEE
RSSSDTSEADVRSTKKKGRDNQKVKKKKKKAKEESGDELSNDSQDTGDNNNESKGKKRAE
RLPDLIETTKKGSRRSSDKDKMPKDKKSSKEKGEEHAAGDEEGKKKKKEKKKKGSDKGDS
DDDTKKTKGKKKKIENYVEIYENELRNYEPEKVESYEDEYHKKKIYEVVTITGDERGAGT
DANVFVTLFGDYGITPKVHLASNTEKRSRTAFERGKTDVFRIRTHNVGHLKKIRIEHDNT
GLSANWFLDRVVVTDVIRPHLRFYFACNNWFSKVEGDCLFVRDLLGSMDPMDIPKYNKYI
VSVFTADVKGSGTDADVFINIFGEFGDTGERRLDNEKNNFEKGTEDKFTIEAPNLGKVRK
ITIGHNNKGSSAGWFVDKAVVDDMGNKIVYEFPINRWFAIDEDDGKIQRDILVGGSQPTG
IVYNVQVMTGNIRGAGTNSKIHIVMHGSKGQKNSGKVFLEGGKFERCLTDIFNVEIAALL
SPLSRVTIGHDNDGVSAGWYCEKVVVFCPFTGTEQTFPCCKWLDEKEGDGLIERELHEMV
SLRQKRQKKHPWSLWIWTSDLPSAGTDADISFQVYGDKGKSDETRLDNKTDNFEQGQVDK
FMVELPELGKLIKLRIWHEKRNPFAGWHLSKVTMMKTLTKEKYNFPCERWLDVNEDDNEV
VRELSATGDFNAEPLPVIKYRVTVCTGSVGGSGTDASVFLNLIGDLGDSGNRDMVNCKNN
VNKFEKGNYDEFIVESVSIGQVRRVRIGHDGKGGGCGWFLDKVIVREDGQAEAQAMEFPC
NRWLDRNEDDGQIVRELVPFSDGQRLYNVDYHIAVKTGSIPGSSSDSNVFVKLYGEKGDT
SKILLVVSDNNLGNYFETGRVDIFVVETYDIGQINRLLIGHTNEGMRAGWFLDSVQLMVP
VHGKQYMFPSDRWLDTSEADGKTEVEIYPSETLDMEQLINYEVTVVTGDVTFAGTNAGVF
IQIFGDKGKTEVLTLASRSNNYERNTTEIFKLEAKDVGKVFKIRIGHDGSGIGSGWFLET
VDVKHLIMAMVPKEKKKEDKKKKKKKKKDEEDDDEAGGEEMQEVVLTYHFPCSRWLAGGE
EDGELVVELLPEEAEDLEVNTYEVCVFTGDTLGAGTDANVFINIYGENGDTGERYLKNSD
NINKFERGQEDVFIVTAVELGPLKKLRIRHDNSNSHSSWYLDRVEIVDTKDDTTYYFPCT
RWLAVDEDDGQIARELVPVDEAFMKKDEDEDSGATLGLEQKSMSTTYTLKIKTGEKKYAG
TDANVFAILFGENDDTGIINLKACKNFKNKFEQGMINEFTVEAVDLGDLETFRIGHDNSG
GSSGWFLDWVEIDAPSQGQRLRFPCGRWLDNGEDDGLFVRDLYPADLQTELYMPFVPYEI
KIYTSDVFGAGTDADVFIVLYGQKGVCTQQKHLCVNKRERRLYFERGAEDMFIVELEDVG
DVLEKIRIGHDNKGTNPGWHLDRVEIRRQLRKGKGSETTIFPCECWLAKSEDDGETVREL
VPSDIITEKLLRDGKLKTTEVEVEDALETHMYTVSVRTGDMYGAGTDANVYLTIYGDLGD
TGERKLAKSENNKNKFERGEVDKFSIEAVDLGQVFKIHIRHDNSMIGADWNLDQVEVLDL
ETDEVYMFLCERWLSKKKEDRSIARTFFVKGYEGERNIDPNSKKMLQAKLGLDRNANKKK
KKKKVAVAEEGPIIPYHFTLSTGMEREAGTFARVYVIITGPNDMETDRLWLDLPEGKNCF
TAGTMEHFVSYGTDVGEIKRVELGHNGVTPESCWLVDELSVAVPTKGIKYIFPCKCWLAK
DRGDGLTARLFNVLDASTININRKVIYSATVVTGDTQYAGTDTNIFLTVYGANGSTEEML
LPKNGDRFERDQEDTFSLEVDDIAPLKKIRVRIDCSGSRPDWFLDRILMRNLNTEDTYLF
TYENWLSKTKGPKRIKVCELGAVVDEEEMVEKTTYIIQVQTSDVGGAGTDANVFLMVFGE
YGDTGTLPLKESTNRNKFERKMKDVFRFPEMLSLGELSKIRVWHDNKGPCPGWHLEYIDV
KDEAMDQTFRFPCDRWLAKNEDDGQIMRELACANNDAIDLSDKTKYEIATTTATTDNAST
TENAWIVLEGRKARSKEFVLENKKKKFLRGATDAFEFSSKHLGEIAGICIGHITKDGKKV
KSEAFWHVLEVVVTEKELGNKYFFHCDAQIPLAAKKDKFLTFECFKTIESFASKVRNLVP
VKYEFIVITGDVKGAGTDSNIFISIYGVNGDSGKRHLQKKFRNLFERGQTDRFVLEMLDL
GELLRVKVEHDNSSTNSGWYLECVEVTNTANSVTTIFQCGKWLDSHKADGQIQRVLYPKY
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaaaaaagaaaaaaacaagacagagtggagaagaggaaaccaaagatgtggat
gacgaaggctcagaggatcaagaaccaaagcccaagaagaaaagtaagcaggcgagtgag
tatgctgggagattgaagaagaagaagaagaagaagaagcttgaagacagcgatgaagaa
agatctagttctgacacgtcagaggcagatgtgaggagcaccaagaaaaaagggagggat
aatcaaaaggtcaagaagaagaagaagaaagctaaagaggagagcggggatgagttgagc
aatgactcacaggatactggagataacaacaatgaatccaaagggaaaaagagagcagaa
agactccccgatttgattgagaccactaagaaaggatcaagacggtcctcggacaaagat
aaaatgccaaaggataaaaaatccagcaaggaaaagggggaagaacatgcagctggggat
gaagaaggtaaaaagaaaaaaaaagaaaagaagaagaaaggttcagataagggagatagc
gatgatgacaccaagaagaccaaggggaaaaagaagaagattgaaaattatgttgaaatc
tatgaaaacgagcttcgcaactacgagccagaaaaagtggagagctacgaggatgagtat
cacaaaaagaaaatatatgaggtggtgaccatcactggcgatgagagaggagcaggcacc
gacgccaacgtgtttgtcactctattcggagactatggcatcactcccaaagtccacctg
gccagcaacacagagaagaggagtcgcacggcattcgaaagaggaaaaactgatgtgttc
agaatcagaactcacaatgttggacatttgaaaaagataaggattgaacatgacaacacg
ggcctgagcgccaactggttcctggaccgggtggtggtgacggacgtgatccggcctcac
ctgaggttctactttgcctgtaacaactggttcagtaaggtggagggagactgcctcttt
gtcagagatctgctgggtagcatggacccaatggacattcccaaatataataagtatata
gtgagtgttttcactgcagatgtgaaaggcagtggaacagatgcagatgttttcatcaac
atctttggggagtttggagacacaggtgaaagacgacttgacaatgagaaaaataacttt
gaaaagggcacagaggacaagttcaccatcgaggcaccaaacttgggcaaagtgaggaag
atcaccattggccataataacaaaggctcttcagcaggatggtttgtggacaaggcggta
gtggatgatatgggaaacaaaatagtttatgaattcccaatcaatcgttggtttgccatc
gatgaggatgatgggaagatacagagagacattttggtggggggcagtcagcccacaggt
attgtgtacaacgtccaggtcatgacaggaaatatccgaggtgccgggaccaactccaaa
atccacattgtgatgcacggctcaaaaggccaaaagaacagtggcaaggtgtttttggaa
ggaggaaagtttgaacggtgcctgacagacatctttaatgttgagatcgctgcgctgctc
agtcccctcagcagagtcaccatcggacacgacaacgacggagtcagtgctgggtggtac
tgtgagaaggtggtggtgttctgtccgttcaccgggacagagcagaccttcccatgctgc
aaatggctggatgagaaggagggagatggtctgatagaaagagagctccatgagatggtc
tcactcaggcagaagagacagaagaagcatccctggtccttgtggatctggacgtcagac
cttcccagtgcaggaaccgatgcagacatctccttccaggtgtacggagacaagggcaag
agcgatgagaccagactggacaacaaaacagacaattttgagcagggacaggtggacaag
tttatggttgagctgcctgagttgggaaaactgatcaaactacgtatctggcacgagaag
agaaatcctttcgctggatggcatctcagtaaggtaactatgatgaagacattaacaaag
gagaaatataattttccttgtgagcgctggctggacgtaaatgaagacgataacgaggtt
gtgagggagctttctgccacaggagactttaatgctgagcccctgcccgtaataaaatac
agggtgacagtttgcacagggagtgtcggcggcagtggcacagatgcgtctgtgtttcta
aatctaataggagacctgggagacagtggaaatcgggacatggtcaactgcaaaaacaac
gtcaacaagtttgagaaaggaaactatgatgagtttatagtggagtcagtatccattggg
caggtccgcagggtgaggattggacatgacggtaaaggtggaggttgtggctggttcctg
gataaagtcattgtaagagaagatggacaggctgaggctcaagctatggagttcccctgc
aacaggtggctggaccgtaatgaggatgacggacagatagtcagagagctagtgccattt
tctgatggacagcgtctttacaacgttgactatcacattgctgtgaagacgggcagtatc
cctgggagcagctcggactccaatgtgtttgtgaagctctacggagagaaaggtgacacc
agtaagatcctgctggtggtctctgacaacaaccttgggaactactttgagacaggtcgc
gttgacatcttcgtcgtggaaacttatgacattggacagataaatcgtctgttgattggc
cacaccaatgaaggcatgcgggccggctggttcctggacagcgttcagctcatggttcca
gtccacgggaagcagtacatgttccccagtgaccgctggctggacacgtccgaggccgac
ggcaagacagaggtggagatctacccgagcgagaccctggacatggaacagctgattaac
tatgaggtaacagtagtaactggagatgtgacctttgctggcaccaacgccggagtgttc
atccagatctttggggacaaggggaagacagaggtcctcacgctcgcaagcagatccaac
aactacgagcgaaacaccacagaaatattcaagctagaggccaaagatgtagggaaggtc
tttaagatccgcatcggtcacgacggctcggggatcggatctggctggttcttggagaca
gtagacgtcaaacatctcatcatggccatggtgccaaaagagaagaaaaaggaggacaag
aaaaagaagaagaaaaagaagaaagatgaggaagatgatgacgaggccggaggagaggag
atgcaggaggtggtattgacttaccacttcccctgttctcgctggctggccgggggggag
gaggacggggagctggtggtggagctgctcccagaggaggcagaggatctggaagtcaac
acctatgaagtgtgcgtcttcactggtgacacgctgggtgccgggactgacgccaacgtc
ttcatcaatatttatggagaaaacggagacaccggagagcgttatctgaagaactcagac
aacatcaacaaatttgagcgggggcaggaggatgttttcatcgtcacagctgttgaactg
ggtcctctgaagaagctgcggatccgtcatgacaattctaattctcattcatcttggtac
ctggaccgtgttgagatagtggacacaaaggatgatacgacgtactatttcccttgtacc
cgctggctggcagtggacgaggacgatggacagatagcgagagagctggttcctgtggac
gaggccttcatgaagaaggatgaagacgaggattcaggcgccactctgggcctcgagcag
aaatccatgtcaactacatacactctcaaaataaaaaccggagaaaagaagtatgctgga
actgatgctaacgtgtttgccatcctttttggtgaaaatgacgacacagggatcatcaac
cttaaggcttgtaagaacttcaagaataagtttgaacaggggatgatcaatgagttcact
gtggaggcggtggatttgggcgacctggaaacatttcgaattgggcacgacaactcagga
ggttcatctggttggttcttggactgggtcgagattgacgccccctcacagggtcagaga
ctacgcttcccatgtggccgctggttggataacggagaggatgacgggctgtttgtgagg
gatctttatcccgctgatttacagactgaactctacatgccatttgtgccttatgagata
aagatatacaccagcgatgtgtttggtgcgggaacagacgctgatgtgttcatcgtcttg
tacggtcaaaagggagtgtgcacacagcagaaacacctgtgtgtcaacaagagagagaga
cgtctgtactttgagagaggagctgaggacatgtttattgtggagttggaggatgtcgga
gacgttttagagaagatcaggataggacacgacaacaaaggcacaaacccagggtggcac
ctcgacagagtggagatcagacgacagctcaggaagggaaagggttcagaaacgaccatt
ttcccatgcgagtgctggctggccaagtctgaagatgacggggagacggtgagggagctg
gtcccctcggacatcatcacagagaaactcctcagggatgggaagctgaagacgactgaa
gtggaggtggaggacgctttggaaactcacatgtacaccgtgtctgtgcgaacaggggat
atgtacggagcaggaaccgatgccaacgtttatctcaccatctacggagacctgggagac
acaggagagcgcaaactggccaaatctgagaacaacaaaaacaagttcgagagaggagag
gtggacaagttcagcattgaggctgtggacttgggccaggtgtttaagattcatattcgt
cacgacaactccatgataggggccgattggaacttggaccaggtggaggtgctggatttg
gaaacagatgaggtgtacatgttcctgtgtgagcgctggctgtccaagaagaaagaggac
agaagtattgcaaggactttctttgtgaaggggtatgaaggggaaagaaacattgatcca
aattccaagaagatgcttcaggccaaactggggctggacagaaacgccaataagaagaaa
aagaagaaaaaggtggcagtggctgaagaaggtccaatcatcccttatcacttcactctg
tccactgggatggagcgggaggccggcaccttcgccagggtctatgtcatcatcaccggc
cccaacgacatggagacagaccggctgtggctggacctgccggaggggaagaactgcttc
acagccggcaccatggagcactttgtgtcttatgggactgacgtaggagagatcaagcga
gtggaactcggccataacggtgtcacaccagagagctgctggttggtcgatgagctgtcg
gttgccgtgccaaccaaaggtattaagtacatctttccgtgtaagtgctggctggcgaag
gacagaggagacggtctgactgccaggctgttcaacgtgctggacgccagcaccatcaac
attaaccgcaaagttatttattcggcaacggttgtcacaggtgacactcagtatgcaggg
acagacaccaacattttcctgacggtgtatggagccaatgggagcacagaggaaatgctg
ctgcccaaaaatggggacaggtttgaaagggaccaagaggacacattcagtttggaggta
gatgatattgctcccctgaagaagatcagagttcggattgattgctctggaagtcggcct
gactggtttctcgacaggatcctgatgcggaacctgaacacagaggacacgtatttgttt
acatacgagaattggctgtcaaagacaaaagggccgaagaggattaaggtgtgtgagctg
ggagctgtggtggatgaggaggagatggtggagaaaactacctacatcattcaagtccag
accagtgatgtcggaggtgccggcaccgatgccaatgtgtttttgatggtgttcggggag
tacggggacaccgggacgctgcctttgaaggagagcacaaacaggaacaagtttgagcgg
aaaatgaaagatgtgttcaggttccccgaaatgctcagtctgggcgaactgtcaaagatc
cgtgtgtggcacgacaacaaaggcccctgtcccggctggcacctggagtacattgacgtg
aaagatgaggccatggaccagaccttcaggtttccctgcgaccgctggctggctaaaaat
gaagatgacgggcagataatgagggagctggcctgtgccaataacgacgctatagacctc
agtgacaaaaccaaatatgaaattgccacaacaactgctaccacagacaacgcctccacc
acagaaaacgcctggatcgtgttggaaggaaggaaggctcgttctaaggagtttgttcta
gagaataagaaaaagaagttcttacgcggtgccactgatgcctttgagttctcatccaaa
cacttgggggagattgctggcatctgcatcggccacataacaaaagatggaaagaaggtg
aagagtgaagccttctggcatgttttagaggtggtggtgaccgagaaggagctgggaaac
aagtatttcttccactgtgatgcacaaatccccctggcagccaaaaaagacaaattcctg
acatttgagtgctttaaaaccatcgagagctttgcgagcaaagtacgaaacctggtccct
gtgaagtacgaattcattgtcatcaccggggacgtgaaaggagcgggcacggactccaac
attttcatcagcatttatggcgtcaacggtgactcgggcaaacggcatttgcagaaaaag
tttcgcaacctttttgagcgagggcagacggaccgctttgttctggaaatgctggacctc
ggggagctgctgagggtgaaagtggaacatgacaacagcagcaccaacagtggttggtat
ttagagtgtgtggaggtgaccaacacagccaactcagtaaccaccatcttccagtgtgga
aagtggctggactcgcataaggccgacgggcagattcagagagtgctctaccccaaatac
tag
DBGET
integrated database retrieval system
