Trematomus bernacchii (emerald rockcod): 117473004
Help
Entry
117473004 CDS
T09643
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03272
Virion - Hepatitis viruses
tben04382
Cornified envelope formation
tben04514
Cell adhesion molecules
tben04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117473004 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117473004 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117473004 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117473004 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117473004 (cldn5a)
04147 Exosome [BR:
tben04147
]
117473004 (cldn5a)
04515 Cell adhesion molecules [BR:
tben04515
]
117473004 (cldn5a)
Cilium and associated proteins [BR:
tben03037
]
Other cilia and associated proteins
Stereociliary proteins
117473004 (cldn5a)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117473004 (cldn5a)
Exosomal proteins of colorectal cancer cells
117473004 (cldn5a)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
L1 family
117473004 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117473004
NCBI-ProteinID:
XP_033974362
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MVSAGLEIVGLALCVLGSFLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMTCVVQSTG
QMQCKMHDSVLALTHDLQAARALTVISSVMGVLGLMVVIAGAQCTNCIQGEYVKARVVNA
GGVTFIVSGLFVLVPLCWMANSIITDFYNPHVPSSKKREIGAALYIGWAASAMLLIGGSL
LCCSCPSSSNSGYSVKYAPTTKRATPNGGDYDKRNYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggccggactggagatcgtgggactagcgctgtgcgtacttggctcgtttcta
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagacaatctgggatggcttgtggatgacctgcgtggtgcagagtacgggc
cagatgcagtgcaagatgcacgactccgtcctcgcccttacccacgacctgcaggcggcc
agagcgctcacggtcatctcctcggtgatgggcgtgctggggctcatggttgtgattgcg
ggggcccagtgcaccaactgtatccagggggagtacgtgaaagcccgggttgtgaacgcc
ggaggggtcaccttcatcgtcagtggtctgtttgtgctcgtgcctctctgctggatggcc
aacagcatcataacagacttttacaacccacatgtgccatcatccaagaagagggagatc
ggcgccgcgctctacatcggctgggctgcctcagcgatgctgctgatcggggggtcgctg
ctgtgctgctcctgtccctccagcagcaactccggatactcggtaaagtacgcaccgacc
acgaagagagccacgccgaacgggggggactatgataagaggaattacgtgtag
DBGET
integrated database retrieval system
