Trematomus bernacchii (emerald rockcod): 117473022
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Entry
117473022 CDS
T09643
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tben01100
Metabolic pathways
Module
tben_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117473022
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117473022
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
117473022
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117473022
Glycosyltransferases [BR:
tben01003
]
Glycan extension
O-Glycan
117473022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
RmuC
TcaA_2nd
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117473022
NCBI-ProteinID:
XP_033974382
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MFKRWLLALVARVGLIVLGLCCCLFLFYLLACKPASHSSQQSLSWSAGATSKEGYMALLQ
EREESHRHYMNSLSKQIAQLKEALQERTQQLQETLEKAKTRGILPQGLESLHKTPTQTDM
KEFFRSQLSQAEVNSGVKLPSEYAVIPFDTFTLRRVYQLETGLTRHPEERPVRKDHRDEL
ISTLETALHVLNGPQQRADNTRRKRTYSPADFIEGLTRTERDRGTVYELMFKGDGPRDFT
QVVLFRPFGPVLKVKSESVNTRSMLINIIVPLSKRPEAFRQFINNFREVCIQKDSRVHLT
VVYFGRDQIDQVKAVLDQTTRETRFRSFTLIQLNEEFSRGRGLEVGARAWRRGQNALLFF
CDVDIHFTADFLTSCRLNAEPGKRVYYPVLFSQYNPSIIYSNQSLLPPVQQQLVIKKDTG
FWRDFGFGMTCQYRSDFLNIGGFDRSIKGWGLEDVHLYRKYLHSKLMVIRSPSRGLFHLW
HEKDCADELPPDKYKMCMQTKAINEASHGQLGELLFKPEIEAHLGKQKNQGT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacggtggcttttggccctggtggcccgggtcggcctcattgtgctgggcctc
tgctgctgtctgttcctgttctacctcctcgcctgtaaacccgcgtcacacagcagccag
caatctctttcttggtctgcgggggccaccagtaaggagggatacatggctttgttgcag
gaaagagaggagtctcacagacattacatgaacagcctgagcaagcagatagcccagctg
aaggaagctctgcaggaaaggacgcagcagcttcaggagaccctggaaaaggctaaaaca
agagggattctgcctcagggtctggagagtttgcacaaaaccccgacacagaccgacatg
aaggagttcttccgctcccagctgagccaggccgaggtgaactcaggtgtgaagctgccc
agcgagtatgcagtgattcctttcgacactttcactctgaggagggtgtaccagctggag
acagggttgacaagacacccagaagagaggcctgtgaggaaagatcacagggacgagctg
ataagcacgctggagacagctctgcacgtcctgaacgggccgcagcaacgcgcagacaac
acaaggcggaagcgcacatactcccctgcagacttcattgaggggttgacccgtactgag
cgggacagaggaactgtttatgagctgatgtttaaaggcgacggcccacgggacttcaca
caggtcgtcctcttcaggccgtttggtcccgtgctgaaggtgaagagcgagagcgtgaac
acgcgcagcatgctcatcaacatcattgtacctctgtccaagaggccggaggctttcagg
caattcatcaacaacttcagagaagtgtgcatccagaaggacagcagggttcatctgact
gtggtctactttggtcgagatcagatagatcaggtgaaggcagtcctggatcagaccacc
agagaaactcggttcaggagcttcactctgatccagctgaatgaggagttttctcgtggt
cgagggttggaggtgggcgcccgggcgtggaggcgcggccagaacgctctgctcttcttc
tgtgatgttgacatccacttcaccgctgacttcttaacttcttgtcgtctcaatgcagaa
cctggtaagagagtgtactacccagtgctcttcagccagtacaatccgtctattatctac
agtaatcagagtcttttacccccagttcaacaacaactggtgataaaaaaagacactgga
ttctggagagactttgggtttggtatgacatgccagtacaggtctgatttcctcaacata
gggggttttgaccgcagcatcaaaggctgggggttggaggacgtgcacctgtacaggaag
tacctccacagtaagctaatggtgattcgctctccatcccggggccttttccacctgtgg
cacgagaaggactgtgcagacgagctccctccagacaaatacaagatgtgtatgcagacc
aaagccataaacgaggcctcgcacggccagctcggggagcttttattcaaaccagagatc
gaagctcatttgggcaagcagaaaaaccaaggaacatga
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