Trematomus bernacchii (emerald rockcod): 117473023
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Entry
117473023 CDS
T09643
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117473023
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117473023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
117473023
NCBI-ProteinID:
XP_033974383
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MWSEKDSVFPTQTFSANRFKALDYVFESTTSLKVMMNLLALPPPYVPGSGDLYPDRGELP
EASYRTPWIRGKVISTCKLFVSGSVLDDLGGKKRPVNSPERFNVTLSELKGDLEMIPSSN
PDSINDLNQDEIVSLKSQIENPLQESFYKLTTDQMKPEKENRDLLLPEELMVVDHLLHFK
RHLPTMKAKMSRLRTLPVADPLLCSTGKKLSEDAVFQHCASYEKPPGANTSDFPICANIQ
EEFGKESLMEEESLLLPVVVDTLNLSWEKCTAFSSICGQMDVAPEQLHEQPPVLDMLHKA
IPSDASVSVDISKYEVPEESGNKCCMDGGLMELAGRALLPTEMELDVTLTLTPETNQIKI
CPSTCDLQQEELSALGRLSLVSARAQTEMEAALWTAEKHPTWVMGFLLAEPQINEPVVEF
QPLSEARRVIKSEDLQSHRETGPPQVDLCSSRQFTESMTSELPPTTEEKMEDFQKLSPEH
MEIGSVTMNPTDKPQFPQPKKCEPAAFLAEAPAEDSHLHRETVADTSQNAFLMHKTNNKE
VKPAAVIFSEPAANTNTKDDVSEKRFLDVAAMFPPRETDINTSRGYSKTEQSAVSLGRPG
EKKMDCLSTFMILRSQQRASVTVTRQSSSPALMVDEQKAPSEHHQPPPHPPRQTPDQRYL
SGAVSGNATREQKAAVQTTGQSIPQSSPEGRQEYRVILVQADDSQQHAHCELLAFAEPCL
ISARQLGLNFPGPGDFSCLAPDQTHFILKQQEKALCGKHAQSTERVRDQEALFNQAAVIH
VLVTFKELLLKCDLKTALDYLMKAAEACADQSLQQLVKRLQIILFLSLKNQESNLKLLKL
QQLLAAQLQGRQGQNTVEKILILLSVDSDDIRSLIISSLSHVTGAAVTAVCPEGDKKKLN
GASVVSRMHHSVCVVVHEQHVGADFPWSCFSLVVEYDHPGQSPWATVCRERGISHLSFNT
IISDSEENSKGWWCLEDNVPNVLFVTEGLLNCPLLLQTLESGCNITVLERSHCRSLQFLG
GTQHYCVITVDESTAIVIQEEDELCQERASESVVMRLTALSLQYNCCWLILHCRESQGGG
FSGQAFSNLVLVYSSLVLFGMKSEDLDVKVLMLSDVMEISKWISRICLHSLMASERDPHH
FLDRDWLAVIPSEEEKCLLQFPCINPLVGQLMLRRAPSVQWLLGAPLSQLKELLPEVPQK
VLKLFSDTTSLYTESQAVLTETTHHPRPLNSLWTTTDDPEHNDSEPQPELFCSDGNSSFL
FGADRSFCEPNTDSMQEGHTDFRLDVSTSFSSPEDLHPPQRSWTSSGQWREEDREEGKSS
GWRSRTGAVGRVVGRVNSEWTPKVPTILNTHTGPPGRKSPFELDSTLSFSPNAMQQPAHS
HMSRHSPVYSVHHPDNPHVTYSLSPPAEVTLWGQGQSSNDFLTNSRDTAMIPTNYGSKCW
IGQERKRRGEAAGLIETVMTPLKRGRLSYEKVPGRSDGQTRLKLF
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctgagaaggacagtgtttttccgacgcaaaccttctctgcaaacagatttaaa
gctctcgactatgtatttgagagcaccaccagtctgaaggtaatgatgaacctgctggcc
ctgccgccgccctacgtccccggcagcggtgatctgtacccggacagaggagagctgccc
gaggcctcctaccggaccccgtggatcagaggaaaggtgatctccacatgcaaactgttt
gtcagtggttctgtgcttgatgacctgggaggaaaaaagcgtccagtcaattcacctgaa
agatttaatgtgactctgagtgaactgaaaggggatttggagatgataccaagctctaat
cctgactcaattaacgatctaaaccaggatgagattgtaagccttaagtcacagattgaa
aatccacttcaggaatcattttacaagttgacaactgaccagatgaaacctgaaaaggag
aacagagatctcctcctgccagaagagctcatggttgttgatcacctgctgcactttaag
agacatttacccacgatgaaagccaagatgtccaggctgcggacgctccctgtggccgac
cctctgctctgttcgacaggaaaaaaactctcagaggacgccgtattccaacactgtgcg
tcttatgaaaaacctcccggtgcaaacaccagtgactttccgatatgtgcaaacattcaa
gaggagtttggtaaagagtcgctaatggaagaagagtctctgctgctgccggttgttgtg
gacacactgaatctgagttgggagaagtgcaccgccttttcaagcatttgtggtcagatg
gacgttgctcctgaacagctacatgagcaacctcctgttctggatatgcttcataaagct
atcccttcagatgcatcagtatcggtggacatttccaagtatgaagtaccagaggagtcc
ggcaacaagtgctgcatggatggaggcctgatggagttggcaggacgagcgttgcttccg
actgaaatggagctggatgtgactttgacgctgactcccgagacgaatcaaatcaaaatc
tgtccgtccacatgtgacctgcagcaggaagagctgtcagcgctcggcagactatctttg
gtgtcagcgagggctcagacagagatggaggcggctctttggacggcggagaagcatccg
acctgggtgatgggctttctgttggcagagcctcaaataaatgaaccagtcgtagagttt
cagccgctgtctgaagcccggagagtcataaagtcagaggatctgcagtcccacagggag
acaggacccccgcaggtggatctgtgcagcagccgccagttcacagagagcatgacctcc
gagttaccccccaccacagaggagaagatggaggacttccaaaaactgtcacctgaacat
atggagattggatccgtaacgatgaatccaacggacaaacctcagttccctcagccgaag
aaatgtgaacctgctgcttttcttgctgaagctcctgcggaggactctcatctccataga
gaaactgttgccgacacgtctcagaacgccttcctgatgcacaaaacaaacaataaggaa
gtcaaacctgcagcggtaatattttcagaacctgctgccaacaccaacactaaagatgac
gtttcagaaaagaggtttttagacgttgcagccatgtttccccctcgtgagacggacatc
aacaccagtagaggatacagtaagacggagcagagtgctgtgtcccttggacgtccaggg
gagaagaagatggactgtctgtccaccttcatgatcctgaggtctcagcagagagcttcg
gttactgtaacgcgtcagagctcatctccagcactaatggtggatgaacaaaaagcacca
tctgagcatcatcagcctcctccacatcctccgaggcaaacaccagatcagaggtatttg
agtggagcggtgtcaggaaacgctaccagagagcagaaagcagcggttcagacgacgggt
caaagcatccctcagtccagccctgaaggcagacaggaatacagagtcatcctggtccaa
gccgacgacagtcagcagcacgcccactgtgagctgctggccttcgctgagccgtgtttg
atctctgccaggcagctggggctcaacttcccggggccgggggacttcagctgcctggcc
ccggaccaaacacacttcatcctcaaacagcaggagaaggcgctctgcgggaaacatgca
cagagcacagagagggtcagagatcaggaagcactgttcaaccaggcggctgtgattcac
gtgctggtgacattcaaggagctgctgctgaagtgtgaccttaagactgcattagattac
ctgatgaaggcagcggaagcgtgtgcggatcagagtctgcagcagctggtgaagaggctg
cagatcatcctcttcctcagtctcaagaaccaggagtccaacctcaaactgctgaagctg
cagcagctgctggccgctcagctgcagggcagacaaggacagaacaccgtggagaaaatt
ctcatcttactatcagtcgactctgacgacatcagatctctaatcatcagcagtttgagc
cacgtgactggtgctgctgtaactgcagtttgtcctgagggggacaagaagaaactgaat
ggagccagtgtggtcagcagaatgcatcacagtgtgtgtgtggtggtgcatgagcagcac
gtcggggcggacttcccctggagctgcttctctctggttgtggagtacgaccatccggga
cagtcgccgtgggcaacagtctgcagagagaggggcatcagtcacctcagcttcaacacc
atcatctctgactctgaagagaacagtaaaggctggtggtgcctggaggacaatgtgccc
aatgtgctgtttgtcacagaggggcttctcaactgtccactgctgctgcagaccctagag
tcaggatgtaatataacggtgctggagaggagccactgtcgatccctccagttcctcgga
gggacccaacactactgtgtgatcacggtggatgaaagcaccgctatcgtcattcaggag
gaggatgagctgtgtcaggagcgggcgagtgagagcgtagtgatgaggctgactgctctc
tctctgcagtacaactgctgttggcttatcctgcactgcagagaaagccagggaggagga
ttttctggccaagccttcagcaacttggtgttggtttattcctctctggttctgtttggc
atgaagtctgaggatctagacgtcaaggtgctgatgttgtctgacgtgatggaaatatcc
aaatggatcagccggatctgcctccacagcctgatggccagtgagagggatcctcaccac
ttcctggacagagactggctggctgtgatcccctcagaggaggagaagtgcctgctgcag
ttcccctgtattaaccctctggtgggtcagctgatgctgaggagagccccgtcagtccag
tggctcctgggggcccctctgtctcagctgaaggagctgctccctgaggttccacaaaaa
gtcctcaagctgttcagtgacaccacctccctgtacacggagtctcaggcggtcctgact
gagacaacacatcaccccagacccctaaacagcctgtggaccaccactgatgaccccgag
cacaacgactctgaacctcagccagaactgttctgtagtgacggcaacagcagcttcctg
ttcggagccgatcgcagcttctgtgaaccaaacacagactccatgcaggagggccacaca
gactttagacttgacgtgagtacttccttcagcagcccagaggacctccaccccccccag
aggagctggaccagcagtggtcagtggagagaggaggacagggaggaggggaagtcttcc
ggctggagaagcagaactggagccgtggggagagttgttggaagagtaaacagtgagtgg
acaccaaaggttccaacaatcctcaacacccatacaggacctccaggacgcaaaagtcct
ttcgagctggactccaccctcagcttcagccccaacgccatgcagcagccagcccacagt
cacatgtccaggcactcgccggtctacagtgtccatcaccctgacaacccccacgtcacc
tacagcctgagccccccagcagaggtcacgctgtggggtcaaggccaaagtagcaacgac
tttctcaccaacagcagagacaccgcgatgattcccactaactacggctccaaatgctgg
atcggacaagagaggaagaggaggggcgaggctgcagggttaattgaaacagtgatgaca
ccgctgaagagggggaggttaagctatgagaaggtgcccggcagaagtgatggacagacg
aggcttaaattattctaa
DBGET
integrated database retrieval system
