Trematomus bernacchii (emerald rockcod): 117473031
Help
Entry
117473031 CDS
T09643
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00061
Fatty acid biosynthesis
tben00071
Fatty acid degradation
tben01100
Metabolic pathways
tben01212
Fatty acid metabolism
tben03320
PPAR signaling pathway
tben04920
Adipocytokine signaling pathway
Module
tben_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117473031
00071 Fatty acid degradation
117473031
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117473031
03320 PPAR signaling pathway
117473031
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tben01004
]
117473031
Enzymes [BR:
tben01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117473031
Lipid biosynthesis proteins [BR:
tben01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117473031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
117473031
NCBI-ProteinID:
XP_033974393
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAGKHGCPWCPNTEEPRAVPLSTAKAQTALAPADQLWSTSRDQAVRLRMEGSGPASETPI
TVHQLFMETVENYGDLPALVSKTEGQWVTLTWRQYYEQCRAAAKSFLKLGLERYHGVGIL
GFNSAEWFISDVGCIFAGGLATGIYTTNSPEACQYVAESCEANILVVENQKQLEKILQVK
DQLPHLKAIVQYKGELKQKAPFLYTWAEFMKQGEDVPDEQLDAVIDSLRANECCILIFTS
GTTGNPKGVMLSHDNLTWTVRTAAPMADLKYGEEVVVSYLPLSHVAAQLIDMWMCVCFAM
TTYFADPDALKGSLVNTLKEARPTCFLGVPRVWEKMQEKMKAAGAKASPMRSAVAGWAKS
IGLQYNYSVMNGENQVPLGFMLANNLVFKRVREALGLDRCKLCFTGAAPITKDTLEYFMS
LNMPLLELYGMSESSGPHTISSNSSYFITSCGKVMPGAKTKLENPDQDGSGEICFWGRHV
FMGYLNMPDKTREALDQDGWLHSGDLGRHDKNDFLFITGRIKELIITAGGENIPPVLIED
SVKSEVAIISNAMLIGDRLKFLSIMITLKCVVDDNGDPTDALTTEALSFCQQHDVTVTTV
SGIIANKEPAIYTAIQEGIERVNARATSNAQKIQKFVILEQDFSIGGGELGPTMKLRRPI
VVKMYQEKINKLYGVATEK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaacacggctgcccatggtgtcccaatacagaagagcccagggcagttcct
ctgtcgacggccaaagcacagaccgctctggccccagcagaccagctatggagcaccagc
agagaccaggcggtgcggctgaggatggagggctcgggcccggcctcagaaacccccatt
accgtccatcagctcttcatggagacggtggaaaattacggggatcttcccgccttggtt
tccaaaacagagggccagtgggtgaccctgacgtggaggcaatactacgagcagtgccgt
gcagcagctaaaagcttcctcaagttggggctggagcgttaccatggtgtggggatcctg
ggattcaactcagctgaatggttcatctcagacgtcggctgcatttttgccgggggtctg
gcaactgggatttacaccaccaactcacctgaagcttgtcagtatgttgctgaaagctgt
gaggctaatatcctggttgtggaaaaccagaaacagcttgaaaaaattctgcaggttaaa
gatcaactacctcatctgaaagcaattgtccagtataaaggcgagctgaagcagaaagca
cccttcctgtatacatgggcagagttcatgaagcagggagaagacgtgcctgacgagcag
ctggatgctgtgattgacagccttcgggccaatgagtgctgcatcctcatctttacctcg
ggaacaactggcaaccctaaaggagtcatgttgagccatgacaatctgacatggacagtc
cgtacggcagctcccatggccgatcttaagtacggtgaggaggtggtggtcagctacctg
ccgctcagccatgtggcagcccagctaattgacatgtggatgtgtgtttgttttgccatg
acaacatacttcgcagatccagatgctctcaagggctccttagtaaacacactgaaggag
gctcgtcccacttgtttcctgggggttcctcgtgtgtgggagaagatgcaggagaagatg
aaagctgccggtgccaaggcatccccaatgaggagcgcagtggcaggctgggccaagtcc
ataggcctgcagtacaactacagtgtcatgaacggggagaatcaggtgccattgggcttc
atgctggctaataatctggtctttaagagggtccgtgaagcgctgggtttagaccgctgc
aagctctgcttcacgggcgctgcccccatcaccaaagacactctggagtacttcatgagc
ctgaacatgccgctgttggagttatacggcatgagtgaaagctccggcccacataccatc
tcttctaacagcagctactttatcacaagctgtggaaaggtgatgccaggcgccaagaca
aagctggagaaccctgatcaggacgggagtggagagatatgtttctggggtcgccacgtc
ttcatgggctacctgaacatgccggacaaaacaagagaggccctcgaccaggacggctgg
ctgcactctggagatctgggaagacacgacaagaatgacttcctcttcatcacaggaagg
atcaaggagctgatcatcaccgccggaggagagaacatccctcccgtgctcatcgaggac
tcagtgaagtccgaggtggccatcattagcaacgccatgctgatcggagacaggctgaag
ttcctctccatcatgatcacactcaaatgtgtggtggacgacaatggcgatcccacagac
gcactgaccaccgaggccttgagtttctgccagcagcacgacgtcacagtgaccacggtg
tcagggatcatagccaataaggagccagctatctacacagccattcaggagggcatagag
cgcgtcaatgccagagcaacgtccaacgcccagaagatccagaagtttgtcatcctggag
caagacttctccatcggtggaggagaactgggacccaccatgaaactgaggaggcccatt
gttgtgaagatgtaccaggagaaaattaacaaattgtatggagtggccacggaaaagtag
DBGET
integrated database retrieval system
