Trematomus bernacchii (emerald rockcod): 117473042
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Entry
117473042 CDS
T09643
Symbol
adamts12
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117473042 (adamts12)
Peptidases and inhibitors [BR:
tben01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
117473042 (adamts12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Reprolysin
ADAMTS_spacer1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
TSP1_spondin
TSP1_CCN
Reprolysin_4
UPF0561
Motif
Other DBs
NCBI-GeneID:
117473042
NCBI-ProteinID:
XP_033974404
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MRCLQECPVLFLLHFVFILAAGHIELSDSGGLFSLFAEQGQLSESDLSTVHPVKTTADGE
FLSHSLAHHFKGGRVRRDLRPLGLEGQVYYKVNYKGRALMFNLTANNHLVSSGYILERRN
GSANRTEHRGADRNSCYLLGTVEAPDVWGTAAISTCKGLRGFFSLPEGHFFIEPVQNSAE
DPVGTPEPHVVYPRVTTESQRTKRSLEPNETPSLCGVQDALSDSVQVEREREEWEREQQS
EDPRPRSQRSVSRERWVETMVVADAKLIEYHGSDNVESYIFTIMNMVAGIFHDASIGNAI
YVILVRLILLQGEEKELKIVHHADTTLASFCAWQKNLNPQSDTHPAHHDVAVLVTRKDIC
AGMNQPCETLGLSHLSGICQPHRSCNINEDSGLPVAFTVAHEMGHSFGIHHDGQGNDCEL
EGRHPFIMSRQLMYDSSPLTWSSCSKDYITRFLDRGWGFCLDDRPSKRDLTTPLARLGIR
YTTHHQCQLQYGPNATFCHEVDNICQILWCSVNGSCRSKLDSPIDGTRCGPEKWCISGEC
VIVGKLPEKVNGGWGQWTKWSHCSRTCGTGVQSAERECNNPKPEFGGKYCTGERKRYRTC
NTKLCQNNEPSFREMLCSEFDTVPYHNELYQWIPVSNPINPCELHCRPVVEYFTEKMLDA
VTDGTPCFMNNKSRNICVNGVCKAVGCDYGIDSNAVEDRCGVCLGDGTSCETVYKSFDEE
EGFGYMDVGVIPEGARDILVKEVEEAGNFLVLKTETSEEYFLNGNFIIQWNGEYQAGGTT
FYYERSGNMENLTAPGPTTHPVMLQLLFQEKNPGIKYEYIIKKTKGTGNEVIEPIYRWRH
GAWTDCSTTCGLGQQHQPVRCFEMDVGVVDESLCDPASRLEDRIRKCKIMDCPARWWVGG
WQQCTSTCGSDGVRKRTVLCVRTVSGEERVLHPAECKHLLKPKPVVTCNRDVPCGLNWVV
SNWEECPVTCGGSVRSRSVVCAPKKTCDLSTKPRTRSLCALQSCPNSGLRRRPGPPPKYR
QLYPPKSSPSNHSTPTPTWTPPSTMATSAPTAVVTVRKKTTTKETTTAFIPTTASPLTPQ
TTIPEIIDTDDYEPNVHVRKNEDKRGKVFPSKVNSAEKDIKAKGIVKVKVQEEGEEGSTP
NVGMYTPGYDYAVDDRTTEEEGIIDLDVSTSTPLRNPLKSTTPTLHILITPTLQTTPPTV
HTTKAPTTYPAPHTSTESWAKTTQHYPFSDQHTTSRINPHSPWTRRVPLTTPRYHTVPSK
SGFNTTQASSTTRRKPFTTAATPKSTVKIIKQKKPAVTPRKTSSTTRPKNPSSSSKGSRT
KNKNQRPEDPTSSSVSDKSKQMAREPVSMDIFWVVGNWSECSTTCGIGAIWRTVTCSSRN
DEDCASKKRPEPARTCHLQPCATWQSGSWSKCPENCALVGRRHREVQCMDSQSKRPLRPF
HCQAVSSRPLSTLTCPHKPCMAWSTSPWGPCSGSCDEGVHERLVYCPEPHRCSTTLRPNS
TQPCSLKPCTDWRAEDWEECSVSCGGGQQQREVNCLSEQDMAVMPNSLCEKISKPETLRK
CNMQECKTNTGAFCRKNTMTSRFCDKLKLLGRCSLRSIQRQCCVTCRP
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtttgcaagagtgcccggttctttttctgctacactttgttttcattctggca
gccggccacatagagctctccgactctggcggactcttctccctgtttgcagaacaaggt
cagttgtcagagtcagatctatccactgttcacccagtgaaaaccactgctgatggagag
ttcctctcccactctctggctcaccacttcaaaggtgggcgagtcaggcgtgacctgcga
ccccttggtttggagggacaggtttactacaaggtcaactacaagggtcgcgctttaatg
tttaatttgactgctaacaatcacctggtttcaagtggctacatcctggagaggaggaac
ggcagtgccaacaggactgagcatcgtggcgctgacaggaactcctgctacctcctcggc
acagtggaagcccctgatgtgtggggaactgctgccatcagcacatgtaaaggattgaga
ggcttcttctccctgccagagggacacttctttattgaaccagtccagaactctgctgaa
gatcctgtagggacgccagagcctcatgttgtctatccaagagttacaacagaaagccag
agaacaaaacgcagtcttgagcccaacgagacacccagcctctgtggagttcaagatgct
ctcagtgactctgtccaagtggagagggagagggaggagtgggagagggagcagcagagc
gaggaccctcggccccgctcgcagcgctccgtcagcagagagcggtgggtggagaccatg
gtggtggcggacgccaagctgatagaataccatggcagcgataatgtggagtcctacatc
ttcaccattatgaacatggtggcagggatctttcatgatgccagcattgggaatgctatc
tacgtcatcttggttcgcctaattttactccagggagaagagaaagagttgaagatcgtt
caccatgcagacaccactttggccagtttttgtgcctggcagaaaaacctcaacccccag
agtgacacccaccctgctcatcacgacgtggctgtgttggtcactaggaaagacatctgt
gctgggatgaaccagccctgtgagacgctgggtctgtcccacctgtccgggatctgtcaa
ccgcaccgcagctgcaacatcaatgaggattcaggactacctgtcgccttcaccgtcgct
catgaaatgggccacagctttggaatccatcatgacggtcaggggaatgactgcgagctg
gaggggaggcacccgttcatcatgtccagacagctgatgtacgacagctcgcctctcacc
tggtcctcctgctccaaagactacatcacacgcttcctcgatcgtggctggggtttctgt
ctggatgaccgtccttctaagagagacctaaccaccccgctggctcgcctcggtatccgc
tacaccacacaccaccagtgccaactccagtacggcccgaacgcaaccttctgccatgag
gtcgataacatttgccagattctttggtgttcagtcaacggatcctgtcgctccaaactg
gactcgcctatagatggcacccgctgtggaccggagaagtggtgtatctcaggagagtgt
gtgatagtgggtaaactcccagagaaggtgaatggaggctggggacagtggacgaaatgg
tctcactgctccaggacctgcgggactggagttcagtcagcagagagggagtgtaacaac
cccaaaccagagtttggtggcaagtactgcaccggggaaaggaaacgatatcggacctgt
aacacaaagctgtgtcagaataatgaaccaagctttcgagagatgctgtgcagcgagttt
gacactgtgccttaccacaatgagctctaccagtggatccctgtgtccaacccaataaac
ccctgtgagctgcactgtcgaccagtcgttgagtattttacggagaagatgctggacgct
gtgacagatgggactccgtgcttcatgaacaacaagtccagaaacatctgcgtcaacgga
gtgtgcaaggcggtaggctgtgactatggcattgactcaaacgctgtggaggatcgctgc
ggggtctgtttgggtgacggcacaagctgtgagacggtctacaagtcgtttgatgaagaa
gaaggctttgggtacatggacgtgggtgtgatacctgagggggcgcgggacatcctggta
aaggaagtggaggaagcaggtaacttcctggttctgaagaccgagacctctgaggagtat
tttctcaatggcaactttatcatccagtggaacggggagtaccaggccggcgggacgacg
ttctactacgaacgcagcgggaacatggagaacctcacggcgcctggacccaccacacat
cccgtcatgctgcagttgctgttccaggagaaaaacccaggtataaagtatgagtacatc
atcaagaagacaaaagggacaggaaatgaagtcatcgaacccatctacaggtggaggcac
ggggcatggactgactgcagcaccacctgtggcttaggtcagcagcaccagcctgtgcgg
tgctttgagatggacgtgggtgtagtggatgagtctctgtgtgacccggccagccgtctg
gaagacagaatccgaaaatgcaagattatggattgtcctgcaaggtggtgggtgggtggc
tggcagcagtgtacatccacctgtggatctgatggggtacgaaagcgaacggtgctctgt
gttcggacagtctcaggggaggaaagggtgctccaccctgccgagtgcaagcatctccta
aaacccaaacctgtggtgacgtgcaacagagatgtaccctgtggtctgaactgggttgtc
agcaactgggaagagtgcccagtcacatgtggaggcagtgttcgatcacgttcagtcgta
tgtgcaccaaagaagacctgcgacctctcaactaaacctcggaccagatcactgtgcgcc
ctacagagctgccctaactcaggtcttcgtagacgccccggtcctcctcctaaataccgc
caattgtaccctcctaagagcagccccagcaaccactccacgcccacacctacctggact
cccccgagcaccatggccacatctgcacccacagctgttgtcactgtgaggaagaaaaca
accaccaaagaaactacaacagctttcatccctaccaccgcttcccctctaacccctcaa
accacaatccctgaaatcatagacacagatgattatgagcccaatgttcacgtgagaaaa
aatgaggataagagagggaaagtcttcccatctaaagtcaattctgctgaaaaggacata
aaagctaaaggcattgtaaaggtaaaagttcaggaggagggagaggagggcagtacacca
aatgtggggatgtatactccaggatatgattatgctgttgatgataggacaacagaggag
gagggtattattgacctggatgtttccacatctacacccctgagaaaccctcttaaatca
accacaccaacactacatatccttattacacccactttacaaacaactccgcctaccgtg
cacacaaccaaagcacccaccacctaccccgccccacacaccagtactgaatcatgggca
aagaccactcaacactatcccttctcagatcaacacacaacctctcgtattaacccacac
agcccctggacacgcagggttccactcaccactcccagatatcacacagtaccatcaaaa
tctggtttcaacacaacacaagcgtcttccacaactagaagaaaacctttcaccactgca
gcaacccccaagtctacagtgaagatcattaaacaaaagaagcctgcagtgacaccaagg
aaaaccagttctaccactcgtcctaaaaatccctcttcctcgtctaaaggaagtcgcacc
aagaacaaaaaccagcgaccagaagatcccacaagcagctccgtcagtgacaaaagcaag
cagatggctagagagccagtcagcatggatatattctgggtcgtaggaaactggagcgag
tgttcaacaacatgtgggattggagcaatatggaggacagtaacatgcagctcccggaat
gatgaggactgtgccagcaagaagagacctgagcccgcgcgcacgtgtcacctgcagccc
tgtgccacctggcaaagtggcagctggagcaagtgtcctgaaaactgtgcattggtggga
aggaggcaccgtgaagtccagtgtatggattctcagagtaaacgtcccctcagacctttc
cactgtcaagctgtgtccagcagacccctcagcaccctgacctgcccccacaagccctgt
atggcctggagcacatcaccctggggaccgtgctctggcagctgtgatgaaggtgtccat
gagcggctggtgtactgtcccgagcctcatcgctgcagcaccacactgaggccaaacagc
acacagccctgcagtctaaagccctgcaccgactggagggccgaggactgggaggagtgc
tctgtgagctgtggtgggggtcagcagcagcgtgaagtcaactgtttgagtgagcaggat
atggccgtcatgcccaacagcctctgtgagaagatatccaaaccagaaacactcaggaag
tgcaatatgcaggaatgcaagaccaacacaggtgcattttgcaggaaaaacaccatgacc
tctcgcttctgtgacaagctgaagctgctgggtcgctgctccctcaggtccatccaaaga
cagtgttgtgtcacctgtcggccttag
DBGET
integrated database retrieval system
