Trematomus bernacchii (emerald rockcod): 117473046
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Entry
117473046 CDS
T09643
Symbol
plat
Name
(RefSeq) tissue-type plasminogen activator isoform X1
KO
K01343
tissue plasminogen activator [EC:
3.4.21.68
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117473046 (plat)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117473046 (plat)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tben00536
]
117473046 (plat)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.68 t-plasminogen activator
117473046 (plat)
Peptidases and inhibitors [BR:
tben01002
]
Serine peptidases
Family S1: chymotrypsin family
117473046 (plat)
Glycosaminoglycan binding proteins [BR:
tben00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
117473046 (plat)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
Kringle
DUF1986
EGF
hEGF
Trypsin_2
cEGF
DUF316
JAG1-like_EGF2
Death_TNFRSF11B
Motif
Other DBs
NCBI-GeneID:
117473046
NCBI-ProteinID:
XP_033974409
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MTRTLELVVFLCALCCCLAENVELLRTKRGTRFYRGEPDRRPARRTLVIIHVQKSTSSFD
TSLHCVDSETSAVRSFGDTWLRWRGQRVEYCRCALRGQQRCHIVPVINCYVSQCYNGGTC
KEAVYTSDYICQCPPGFSGTQCEINSNEKCVLGQGEGYRGTWSISHSATECINWNSTSLR
GKKFTARKPDASLLGLGNHNFCRNPDNDSTPWCYVYKGTQIVWEFCSMPRCPKDRNQQCV
LGSGQSYRGTASVTKSGSRCLPWDAPSIKRKLYNAWRSDALEQGLGSHSFCRNPDGDAGP
WCHTYKNMQLTWELCDIPKCSRRPSIISTLGPRAPTTNNNNRATCGQRLDNTLNRPSFRM
FGGRESDITEQPWQAAINVYQARHRKHFHRCGGVLIDSCWVLSAAHCFEDNDKAEKLEVI
LGRTFRKQNSSSEQIFKVEKYWNHEKFDNETFDNDIALLKLKTDIGICAVNSPEVLPACL
PARGLVLPDWTECEISGYGKDSEFSAEFSERVKRGYVRLWPKERCVPDVLSQRTITPNML
CAGDTRGLDDACKGDSGGPLVCRNNDKMTLMGVISWGDGCGQKDKPGVYTRVTHYIDWIN
SIIKANPV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaacacttgaactagttgtgttcctgtgtgctctctgctgctgcctagcggaa
aatgttgagttgctccgcactaagagagggactcgtttttacagaggtgagcctgacagg
cggccagcaagacggacgcttgtgattattcatgtccagaagtctacatcttcctttgac
acctccttacattgtgtggatagtgaaacgtcagcagtgcgtagttttggtgacacttgg
ctgcgatggaggggacagcgtgtggagtattgccgttgtgcattaagaggacaacagcgt
tgtcacattgtgcccgtcatcaactgctacgtgtctcagtgctacaacggaggaacctgt
aaggaggcagtttacacttctgactacatttgccagtgtcccccaggcttcagtgggact
cagtgtgagataaacagcaatgagaagtgcgttttggggcagggtgaagggtaccgcggc
acatggagcattagccattcagcgacagagtgcatcaactggaactccacgtctctgaga
ggaaagaagttcacagccaggaagcccgacgccagccttctcggactgggcaaccacaac
ttctgcagaaaccccgacaatgacagcactccttggtgttacgtctataaaggcactcag
attgtgtgggagttctgttccatgcccagatgtccaaaagataggaaccaacaatgtgtg
ctgggctcgggtcagtcatacagaggcacagcatctgtcactaagagcggctctcgctgt
ctgccctgggacgctccttctattaaacgcaaactctacaatgcctggagatctgatgca
ctggagcaggggctgggcagccacagcttctgcaggaatccagacggtgatgcaggtcca
tggtgtcacacctacaagaacatgcagctgacctgggagctgtgtgacatacctaaatgc
tcaagacgtccatcaatcatcagcactctcggtccacgtgcccccaccactaacaacaat
aacagagcaacatgtgggcagcgcttggacaacaccttgaaccgcccgtcgttccgcatg
tttgggggcagagagagcgacatcacggagcagccgtggcaggcggccattaacgtttac
caggcccgccacagaaaacactttcacagatgtggaggtgtcctcattgactcctgttgg
gttctgtctgctgcacactgctttgaggacaatgataaggctgaaaaattggaagtgatc
ttgggaagaacatttcggaaacagaattccagcagcgagcagattttcaaggttgagaag
tactggaatcacgagaaatttgacaacgaaacgtttgacaatgacattgctctcttgaag
ctaaagacggacattggcatctgtgctgtaaactctccagaagttctccctgcgtgtctg
ccggcccgcgggcttgtgctgcccgactggaccgagtgtgagatctcaggctatggaaaa
gactcagagttttctgcagagttctctgagcgtgtgaagagaggttacgttcgcctgtgg
cccaaagagcgctgtgtcccagatgtgttgtctcaacgcacaattacccccaacatgctg
tgtgcaggcgacacccggggcctggatgatgcatgcaagggagactctggtggcccgctc
gtctgtcggaacaacgacaagatgaccctgatgggtgtgatcagttggggcgatgggtgt
gggcagaaggataaacccggggtctacacccgcgtcacccattacatcgactggattaac
agtataattaaggcaaacccagtctaa
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integrated database retrieval system
