Trematomus bernacchii (emerald rockcod): 117473061
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Entry
117473061 CDS
T09643
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117473061 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117473061 (ufd1l)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117473061 (ufd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
117473061
NCBI-ProteinID:
XP_033974426
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MFSFHVFDHPLSRGFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERRPQHQEEPTEEEADPTSYADMDLGFRAFTGNGNRLDGK
LKGIEPSPVPLDPSDIKRGIPNYDYKVGRITFIRNSRPLPRKAFDEEDELNRFIAFSGEG
QSLRKKGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgttccacgtgttcgatcacccgttgtcccggggctttcagaaccgcttctcc
actcagtaccgatgctactcggtgtccatgctggccggtcccaacgaccgctcagacgtg
gagaaaggaggcaaaatcataatgccaccttcagctctcgaccagctcagcaggcttaac
atcacctatccaatgctgttcaagctgaccaacaagaactcagacagaatgacacactgt
ggcgtactggagtttgtggcagacgagggaatctgctacctgccacactggatgatgcag
aatcttctactagaagaaggaggtctggtccaagtggaaagcgttaacctgatggtggcc
acctactcaaagttccagccacagagccctgatttcctggacattacaaaccccaaggca
gtactggagaatgctttgagaaactttgcctgcttgacaactggtgacgtcgtcgctatc
aactacaatgaaaagatatatgagctgcgagtcatggagacaaagccagataaagcagtg
tccatcatcgagtgcgatatgaacgtggattttgatgctcctttgggttacaaagagcct
gaacgacgacctcagcaccaggaggaaccaacagaggaggaagcagatcccactagttac
gccgacatggatctgggatttagagcttttaccggcaatggcaatcgtttggatggaaaa
ttaaaagggatagagcccagccctgtacctcttgacccaagtgacatcaaaagaggcatt
cctaactacgattacaaagttggcagaatcaccttcatcagaaactcaaggcctctgccc
aggaaagctttcgatgaggaggatgaattgaacagattcatcgccttctctggagaagga
cagtcactacgcaaaaagggaagaaagccttga
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