Trematomus bernacchii (emerald rockcod): 117473102
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Entry
117473102 CDS
T09643
Symbol
si:dkey-3h3.3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117473102 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117473102 (si:dkey-3h3.3)
Enzymes [BR:
tben01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117473102 (si:dkey-3h3.3)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117473102 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-RING_4
zf-RING_10
zf-RING_11
zf-C3HC4_4
IBR
Pellino_RING
DUF1272
DZR_2
RE_Alw26IDE
Motif
Other DBs
NCBI-GeneID:
117473102
NCBI-ProteinID:
XP_033974478
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MEQIITDLTVQIDVTYCKDPGRIKKILQPYKPEKKAHGYIVRGTFKEVDQLMEKLSEVMR
PTSPVTRGQIKPVDVSGVVMAYIKEKSDRELKKIEGNHFHIVPLHDKASSTEQVTFRSHQ
GSSEPVHADFVRQRFITFYQRTASDLQVTSVSVSPQHLRDLQRTFPRLLFEPTTTSPSRS
EVTVTGPFLHIAQLKEFLSQKTPSPSKSPGNKGPADTPSSRTPGPSSTLSKDPEVEACPI
CMEAIENTEKKTLGCKHSFCRDCLKRAFDYKPICPMCGALYGTLTGTQPDGGSMDVTKSS
SSLPGYEKYGAITINYYIPSGIQKEEHPHPGQPYEGASRTAYLPDSSEGRGVLKLLTRAF
RQKLIFTVGRSTTSGRNNIVTWNDIHHKTSTHGGPTHYGYPDPDYLSRVRDELKVKGIE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatcatcacagacctcactgtccagattgatgtaacttattgcaaagatccc
ggaagaataaagaagattcttcaaccttacaagcctgagaagaaagctcacggctacatc
gtgagaggaaccttcaaggaggtggaccaacttatggaaaaactgtcagaagtgatgcgc
ccaacctctcccgtcacaagggggcagatcaaacctgtggatgtatccggggtagtcatg
gcctacattaaggaaaaaagtgatagagagcttaagaaaattgaagggaatcattttcac
attgtaccattgcacgataaagccagcagcacagaacaggtgaccttcagatcacaccag
ggatcctcagaacctgttcatgcagactttgtccggcagaggttcatcacgttctaccag
aggacggcctccgacctgcaggtcacatctgtctctgtgagtccgcagcacctcagagac
ctgcagagaacatttccacgtctgctttttgaacccacaacaacaagccccagcagatct
gaagtaacagtgaccgggccttttctgcacattgctcagttgaaagagttcctttcacaa
aaaacaccaagcccgagcaagagtccagggaacaaaggtccggcagacactccaagcagc
agaaccccaggtccttcatctacactcagcaaggaccctgaagtagaagcatgtccaatc
tgtatggaagcgatagaaaacacagagaaaaagactctgggctgcaaacactcgttctgc
agagactgtctgaagagagcttttgactacaagcctatctgcccgatgtgtggagcgttg
tacggcactttgaccgggacacagccggatggaggcagcatggatgtcaccaaaagctct
tcgtctttgcctggttacgagaaatatggagcaataactatcaattattacattccaagt
ggcatccaaaaggaggagcacccccaccccgggcagccgtacgagggggcgtcccggacg
gcctacctcccagactcctcagagggcaggggggtcctgaagctgctgacgagggccttc
cgtcagaaactcatcttcacggtgggccgctccaccaccagcggacggaacaacatcgtc
acctggaacgatattcaccacaaaacatccacacatgggggaccaactcactatggatac
ccagaccctgattatctcagccgagtccgagatgaactgaaagtcaagggaattgaatga
DBGET
integrated database retrieval system
