Trematomus bernacchii (emerald rockcod): 117473132
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Entry
117473132 CDS
T09643
Symbol
pdzd2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117473132 (pdzd2)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117473132 (pdzd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF4351
Motif
Other DBs
NCBI-GeneID:
117473132
NCBI-ProteinID:
XP_033974518
LinkDB
All DBs
Position
Unknown
AA seq
2411 aa
AA seq
DB search
MPLTQDNALSILPLLENWQGAQNTRPQQDCNLNQDNSSYKGDQDCQNVEGDSVCSSSSVN
SVNVEDMPLCLAAIQKLVEYIKFNFMESDTAPTPSPPSCREGLDIEVRAVAFSKDEFDSA
EFGLSFGNIPIFGDPGGRKKGGPRRRRDQGPIMDVGCIWVTEVRKRSPAARCGGIKLRDE
LLSLNGQLMVGVDVSGASYLAEQCWNGGCIYLIMLRRVKRKAPPPPCNGSISTVSSDSCE
DQQQAGGAPEPPEGPANCKRTRKFGVISRSSFRGSTDSDLQSCYNGSSAPPDAGLSPPGE
DSGCIPPPHTPTEESPDIRSVPQRLHRGTATLPARCHSQLLEYKMDSFSSEPSGQPREGS
HIWKMHMVKGEEGLGIQITGGRGSKRSPHGIIIARVEKAGAIHRDGRLHAGDELLMINGQ
SLVGLTHQEAVGILRSTSGLVQLVVASREEADVGFERFPSTSLPDLVSTCSSLSCPPQTA
PPLSPQTSNCSTDPYLTNMEKVEGQSETEAPRGSCWSPTTTKICSRAQGGGTRLESVGED
DELLVENGVSSCEVVEKPPPGRRKHSLPQQLDSAGVRQEYQIIKKSARSLSTIQVESPWR
LAQPSIISSIVLMKGQGKGLGFSIVGGQDSARGQMGIFVKTIFPHGAAAADGRLKEGDEV
LEVNGESLQGLTHQQAIQTFKQLKRGVVTLTIRTRLRSPSLTPCPTPTLLSRSSSPNSTS
NTSGGGTPIPPAFEEAEGHRGPGPGPKDCIIMEVTLNKEPAVGLGIGVCCLTLENSSPGI
YIHNLALGSVAKMDSRLSRGDQILEVDSVSLRHAALSEAYAILSECGPGPVSLIISRHPN
PKVSEQEMDQMIARSTNRDKMKKRPSSQSQGPSCKSPSPTLKGDGSPALSWTMKRFLEPA
SRQGSLSSETELSQYFSQDGSSHSFLSESVLTASNSEEALHQPSCSTSLEDNSSRPHEVE
SVYPAPPEKPPAPLNHHVEGVCQPISVSSPSSVRSPLLRQRRVMCFEDVLSDEEDSITTR
STALLHRKTTSVPFSEAEASDISKCHSAVLIAASSLDINGNSEDDGGLQRCGSLEVTTPL
CGSVSQCEEALTNKSECPGPESPLMLIRKAGGSICTLSNLTISSENYTNPDDVQLESKRS
PKLEHKAITRVKSMMSIEAPSPPQQQRSKADEPPPGIAPAQSPSSAPLGVRNPKTAGGLV
PHQHCKKGDAGELVGVCTIHTVSLRRSEDESFGLDLEIMSSPLKVLIAGLKPGGAAERES
TGKLCPGDEIVTFGEKLVRSSTYEELCELMHNLPVTLSLEIKRPVSAVDRLSSLMMSSGS
SDGGPTLYPARCVQRTSDEGQALSEHSGNSNHTAQTDHDVQIPITNIDDILSEVSPRSDT
HNKFPDITSPDEPVSCCSGPQTVTLSQEAIIQLPTQSSPQDCCILEAGSGQGAMPPVETT
HENHISHLEPPEAGSKCMYPTGDDSDSSTTDDSVMVSKMADSSGSLLEPSSDEEEVELFS
FNAQQPATDGLCNVSLSPKGFSTSQHASCPNTNLDQTLDVPQGSADVSLTDKDNSGQSSQ
LSQLLGASSTQPPCQPFNSTPTECHIRSATEPCDKVQAGVASSPGTLSTYSSPPPADNHS
VIQGTVEHLHPDALLTSVLFKHLNTQTPHLPSIELETSGLCRSNKTVPASMTNKEKQFEC
KTYPHAMSVLKNTSGLKGFDSSDPPVCSSNFKTQIRASTSAPKLKGLSIKSKIKPQEEPL
QKTTKSESPAPLKHSSKLQPATSISSSLKTYTQSDIYSCHDFPKVTAGSSGSSLHSEELA
KEKDIHSGSKAPIQTPPPATQRTFIEVRLSPISGSSAPVVADHETVTPEDSQRSPGHRDA
RSAAMLPPANSTVDKTSGMVSDTVLNSLCSTKETCNGSKPVAIGELSESLKSSRLSIKTP
ERRSLSTEAAMSADFNPFSVRHKIKSFENLANFDRPAAKSTDIQSYALAYRASLNQRIAG
YMGVVNSIDCRARQRSLSPYVENLIPTTPFSPFLGKSPSNITLINIELPYSSRNTASLSE
DSPEARVQDRAAPHTPQVLRRKHGKLPRSRVRQLRALSMPELEKLSTEDFTRGHGEDGDT
LEPGSYPNMPTKATESSPPAATLTEAEVTGGSRTDPGSHEETPGAGTETQPPSWSISLKE
LSSSPERRCKLQSLLPPPPLRSYVSALLQEAEGLPQVHDNTHLVVLSKEEGSGLGFSIAG
GVDLEQKAITVHRVFTKGTASLEGTIQRGDSILSINGISLGGKTHGETVSCLHQARLSMQ
ALVVIWRDEDGELSSDTPEQSTRNGSGGAGAVVDVGPGGALTVELHKTSAGLGFSLEGGK
SSSQGDRPLLVKRVFKGGAAELSGVIQVGDEVVSINGCSLEGLMHHDAWRIIKATEEGPN
LLLFRRPSTRP
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcactcaggacaacgccctcagcatcctcccactgctggagaactggcagggg
gctcagaacactcgaccacagcaggactgcaacctgaaccaagacaattctagctacaag
ggggaccaggactgccagaatgtggagggggacagtgtgtgcagcagcagcagtgttaac
agtgttaacgtggaggacatgcccctgtgtctggctgccattcagaagctggttgagtac
attaagttcaacttcatggagagtgacacagctccgacccccagccccccctcctgcagg
gaggggctagacatcgaggtccgggccgtggccttcagtaaagatgagtttgacagtgct
gagtttggcctcagctttggaaacatccctatctttggggaccctggtggaaggaagaag
gggggcccgaggaggaggagggaccagggccccatcatggatgtgggctgcatctgggtg
acagaggtgaggaagaggagcccagccgcccgctgtggggggatcaagctcagagacgaa
ctgctgtcactgaacgggcagctgatggtgggagtagacgtcagtggagccagttacctg
gcggagcagtgctggaatggaggctgtatctacctgattatgctgaggcgagttaagcga
aaggcccccccccctccctgtaatggcagcatcagtactgtgagcagtgacagttgtgag
gaccagcagcaggccgggggggccccggagccccctgagggccccgccaactgcaaacgc
acacgcaagtttggagtcatatcgagatcgtccttcaggggcagcacggactcagacctg
cagagctgttacaacggctcctcggccccccctgatgcagggctcagtcctccaggagag
gactcagggtgcatcccccccccccacacacccacagaggaaagccctgacatcagaagt
gttcctcagcggctccatagaggcacggccacgctgccggcacgctgtcacagtcagctg
ttagaatacaagatggactccttcagcagcgagccgtcaggccagcccagagagggcagc
cacatctggaagatgcatatggtgaagggggaggagggcctcggcatacagatcacaggg
gggcggggctccaagcgctcccctcatggcatcatcatcgcccgcgtggagaaggcgggt
gccattcacagggacgggcgtcttcatgctggtgatgagctgctgatgattaacggtcag
tctctggtggggctcactcatcaggaggctgtcggcatcctccgctccacgtctggtctg
gtgcagctggtggtggctagcagggaggaggcagatgtgggttttgagcgcttcccctcc
accagtctgccggacctggtcagcacctgcagttccctgtcctgccccccccagactgcc
ccccctctctccccccagacctccaactgcagcaccgacccctacctgactaacatggag
aaggtagaaggacaaagtgagacagaggcccccagagggtcctgctggagccccacaacc
accaagatctgcagtcgagcccagggggggggcactcgtctggagtcggtgggggaggat
gacgagctgctggtggagaacggggtgagcagctgtgaggtggtggagaagcctccacct
ggacgacgaaaacactccttacctcaacaactagatagtgctggagtgagacaggaatat
cagatcattaagaaatcagcccgctcgctgagcaccattcaagtggagtctccatggcga
ctggcccagccgtccattatctccagcatagtactgatgaaaggccagggcaagggcctg
ggcttcagtatagtcggagggcaggactcagcacgaggtcagatgggaatatttgtcaaa
accatctttcctcatggagctgcagcagctgacggccgactgaaagagggagacgaggtt
ctggaggtgaatggagagtctctgcaaggactcactcaccagcaggccatccagaccttc
aagcagctgaagaggggcgtggtgaccctgaccatccggacccgcctgcgcagtcccagc
ctgacgccgtgccccacccccaccctgctcagccgctccagctcacccaactccacctcc
aacaccagcggggggggcactccgatccccccggcgtttgaagaggctgagggccacagg
ggccctgggcctggacccaaagactgtatcatcatggaggtcactcttaataaagagcct
gctgttggtctcgggattggagtttgctgtctgaccctggagaactcttctcctggcatc
tacatccacaatctggctctgggttctgtggccaagatggacagcaggctcagccgtgga
gatcagatcctggaggtggactcggtcagtctgcggcacgctgctctcagcgaggcctac
gccatcctcagtgagtgtggccccggacctgtcagtctcatcatcagcaggcaccccaac
cccaaggtatcagagcaggagatggatcagatgatagcccgatccacaaacagggacaaa
atgaaaaagagaccctcatctcagtctcaaggtccttcctgtaagagccccagccccacg
ctgaagggggacggctccccggccctcagctggaccatgaagaggttcctggagcctgcc
agcagacagggctctctcagctcagagacagagttatctcagtacttctcccaggacggc
tccagccactccttcctgtctgagtccgtgctgacggcctccaacagtgaggaggcgctc
caccagccgagctgcagcacctccctggaggacaactcttcacggcctcatgaagtggag
agtgtgtaccccgcccccccagagaagccccctgctcctctgaaccaccatgtggagggt
gtgtgtcagcccatctctgtctccagcccctcctcagtgcgaagcccactcctccgtcag
cggcgggtcatgtgctttgaggatgtgctcagtgatgaagaggactccatcaccacgagg
agcaccgcgctcctccacaggaaaactacatctgttcccttcagtgaagccgaggcatct
gacatctccaaatgccattcagcagttttgattgctgcatcatcgttggatataaatgga
aatagtgaggatgatgggggtctgcagaggtgtggaagccttgaggtgaccactcctctc
tgtggcagtgtctcacagtgtgaggaagctctcaccaataagtcggagtgtcctggtccc
gagtcacccctcatgcttatccgcaaagcaggggggtcaatctgtacgcttagtaatttg
accatcagtagtgagaactacacaaacccagacgatgtgcagctggagtcaaagcgctcc
cccaagctcgagcataaagccatcacacgagtcaagagtatgatgagcatcgaagcaccc
agcccgccccagcagcagaggtctaaagctgatgagccccccccaggcatagcacccgcc
cagtccccttcctctgccccactgggggtcagaaaccccaagactgctggtgggctggtc
ccccatcagcactgtaagaagggagatgccggcgagctggtgggtgtttgtaccatccac
acggtcagcctgaggaggagcgaggacgagtccttcggtctggacctggagatcatgtcc
tcccctctgaaggttcttattgctgggctgaagcctgggggggccgcggagagggaatct
acaggcaagctgtgtcctggagatgagattgtcacatttggagagaaactggtgcgctcc
tccacttacgaggaactctgtgagctcatgcacaaccttccagttaccctgtctttggaa
attaagagaccggtttcagctgtagatcgcctttccagtttgatgatgtcatcagggagc
agtgatggaggcccgactctgtacccagccagatgtgttcagagaacatctgacgaagga
caagcattaagtgaacattcagggaattccaaccacacagcccaaactgaccatgacgtt
caaatacccatcaccaatatcgatgacattttatcagaagtgagcccccgcagtgataca
cacaacaaattccctgacataacatcacctgatgagcctgtatcctgctgttcaggccca
cagacagtcaccctgtcacaggaagccatcattcagctcccaacacagtctagcccccag
gactgttgcatcttagaagcaggaagtggacaaggtgccatgcctcctgtggagacaaca
catgagaaccacatatctcacctggaaccacctgaggctggttctaagtgtatgtacccc
acaggagatgacagtgattcgtccaccactgacgacagtgtaatggtcagtaagatggcc
gacagtagtgggagtcttctggagccctcctcagatgaggaagaagtggagttgttttca
ttcaatgcccagcaacctgctactgatggactctgtaatgtaagcctgtcaccaaagggg
ttttcaacttctcagcatgccagctgtccaaatacaaacctggatcagacccttgatgtg
ccgcagggctctgctgatgtctctctgacagacaaagacaactcaggccagtcctcacag
ctctctcagctgttaggggcctcctctacacagccaccatgccaaccattcaacagtact
cctacagagtgccatatcagaagtgccactgaaccttgtgacaaagttcaagcaggtgtg
gcatccagtcctgggacactcagcacttacagcagcccccccccagcagataaccacagt
gtcattcagggaaccgtcgaacacttgcatccagatgccttgctgacctcggttttattt
aaacatttaaatacacaaacaccacatttaccttcaattgaattggagacctcaggttta
tgcagatcaaataaaactgtgccagcatcaatgacaaacaaagaaaagcagtttgagtgt
aaaacataccctcatgctatgtctgtacttaagaacacctctgggcttaaaggctttgat
agttcagacccccccgtgtgcagtagtaactttaaaactcaaatcagagcaagcactagt
gctcccaaattgaaaggccttagtattaagagcaaaatcaaaccacaggaggagcctcta
caaaaaactaccaagagtgaaagtccagctcccttaaagcactcatcaaaattacaacca
gcaacatccatatccagctctttaaagacatatacccagtctgatatatacagctgccat
gatttccccaaagtgacagctgggtcttcaggtagctcactgcactctgaagagctggct
aaagagaaggacatccattcaggctccaaagcacccatccaaacacccccccctgccact
cagagaacgtttattgaagttcgactgtcccccatatctggttcatcagcaccagttgta
gcagaccatgaaacagtgaccccagaagactctcaacgctctccaggacacagagatgcc
agatcagcagccatgcttcctcctgccaactccacagtagacaaaacaagcggcatggtc
agtgacacagtgttgaattcactttgttctactaaagaaacatgtaatggatcaaaacct
gttgctataggggagttgagtgagagcttaaagtcatccagactgtccataaagacgcca
gagaggcgaagtctctccacagaggctgccatgtctgcagacttcaaccccttctctgtc
cgacataagataaagtcctttgaaaacctggctaactttgacaggccggcggctaaaagc
actgacattcagtcctacgctctggcatatagagcctctcttaaccaaaggattgctggt
tatatgggcgtggttaattctattgactgccgggctcggcaaaggagtttaagtccttac
gtggagaatcttattcctaccacacccttctcaccttttcttggtaaatctccatctaat
attacattaataaatattgagcttccatattcgagccgtaacacagcctccctgtcagaa
gacagccctgaggctcgagttcaagatagggctgctccacacactcctcaggttctgcgc
aggaaacacggcaagctgccccgcagcagggtgcggcagctcagggctctcagtatgccc
gaactggaaaaactgagcacagaggactttaccagaggccatggtgaagacggagataca
cttgagcctggcagctatcccaatatgcctacgaaagcaaccgagagctctccacctgct
gcaaccctgacagaagcagaggtgaccggggggagcaggactgatccgggatcccatgaa
gagacccctggagcaggcacagagacacagccgcccagctggtccatcagtttaaaggag
ctgtcctcgtctcctgagcgtcggtgtaagctgcagagcctgctgcccccccccccgctc
agatcatacgtgtcggccctgctgcaggaggctgaggggctcccccaggtccatgataac
actcacctggtggtcctgagtaaggaggagggctcggggctgggtttcagtatcgctggt
ggagtggacctggagcagaaggccattacagttcatcgggtcttcactaaaggcacagcg
agcctcgaaggcaccatccagagaggggacagcattttatccattaatggcattagtctg
gggggtaagacccacggagagactgtgtcctgccttcatcaagccagactgtccatgcaa
gccttagtggtcatttggagagatgaggacggtgagctgagctctgacaccccggagcag
tccaccagaaacgggagcgggggggccggagcagtggtggatgtgggtccaggcggggct
ttaacggtggagcttcacaagacctccgctggcctgggcttcagtctggagggggggaag
tcctccagtcagggagacaggcctctgctggtcaaacgcgtctttaaaggaggcgctgca
gagctgtccggagtgatccaggtcggagatgaagtggtgtccatcaacggctgctctctg
gagggccttatgcaccacgatgcctggagaatcatcaaagccactgaagaggggcccaac
ctcctcctcttccgcaggcccagcaccagaccataa
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integrated database retrieval system
