Trematomus bernacchii (emerald rockcod): 117473171
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Entry
117473171 CDS
T09643
Symbol
gtf2h3
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
tben03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117473171 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
117473171 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117473171 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117473171 (gtf2h3)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117473171 (gtf2h3)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117473171 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
117473171
NCBI-ProteinID:
XP_033974567
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MASDDINLLVIVVDVNPIWWGQQAQRETELTLSKCLDAVMVLGNSHMAMSRTNKLAVIAS
HCQDSHFLYPGKSWGAGDSCEEDASSSGDGXYELLSVANNFIAEEIRKVIAKTDVTGNST
DTLLAGSLAKALCYINRVAKDHEVGQETKSRILVIKAAEDCALQYMNFMNVIFASQKQNI
LIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDCEQRAQLVLPPPVHV
DYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQQT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagatgatattaatctgctggtcatcgtcgtggatgtaaatccgatatggtgg
gggcagcaagctcaacgcgagacagagctcaccctgtccaagtgtctggatgcagtcatg
gtgctggggaactcccacatggccatgtccaggaccaacaagctggctgtcatcgccagc
cactgtcaggacagtcacttcctatatcccggtaagagctggggagcgggcgacagctgt
gaggaggatgcttcctccagtggggatgganaatatgaactcctgtcagtcgctaataac
tttattgctgaagaaatcaggaaggttattgcaaaaacggatgtgacgggaaattccaca
gatactctgttggctgggtcactggccaaagctctgtgctatattaacagagtcgcaaaa
gatcatgaagttggacaagaaacaaaatcaagaatattggtgataaaagcagccgaggac
tgtgccctacagtacatgaacttcatgaatgtcatttttgcttcccagaagcagaacatc
ctgatagatgcctgtgtgttggactcagactcgggtctccttcagcaggcttgcgatata
actggaggattgtacctcaagataccacaaaaagttgctttggcacaataccttttgtgg
gtgttcctgcctgactgtgagcagcgggcccagctggttcttcctccacctgtgcacgtg
gactacagagccgcatgcttctgccacaggaacctcattgagattggctatgtgtgctca
gtatgtctatcaatattctgcaacttcagccccatctgcacaacctgcgagactgccttc
aaaatccaactaccacagatggtcaagcccaaaaagaagaaactcaagcaacaaacatga
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