Trematomus bernacchii (emerald rockcod): 117473177
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Entry
117473177 CDS
T09643
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03267
Virion - Adenovirus
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
117473177 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117473177 (vsig8b)
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
CTX family
117473177 (vsig8b)
BRITE hierarchy
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
DUF4719
Tweety
WBP-1
Tmemb_9
ETRAMP
Sp38
TMEM154
Adeno_E3_CR2
EphA2_TM
DUF3592
SIT
Motif
Other DBs
NCBI-GeneID:
117473177
NCBI-ProteinID:
XP_033974573
EnsemblRapid:
ENSTBNG00005002102
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MEAVFSSARLKLAVLFLLTIRLETDVTEAMQVTSSGPQTIQKALGETVTLGCTYTLGPED
TGELDIEWSNVSPDMTQKDQLLLSYTGGLTMRYGDPSVNKRLKFIVDPKQGDASVSLSNL
VLKDTATYQCKVKKAPGVDMRKVTLNVMVPPTSPKCWVEGPEEKGGPVSLRCKSSQGSIP
LSYTWRRESGGAIPADAIQTLETGELLIKNHTDRNIGSYTCEVKNAVGKGQCKYALHAYN
PTNKVGIIVGAVIGALLLLLLLLLLIWLLVCCCNKRRYEKEVENEIREDAPAPESRPTSR
NSSRHSSLRSVMAYRTHPGVQYSDVRKQLPSVSESAHGGVYTGESNGRSQPNTAGGRASL
NYDNRFGYAV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgttttctcaagtgcaaggctaaagctggctgtgttgtttctgctaacaatc
cggctggagacagatgtgactgaggcgatgcaggtgacgagctcggggccgcaaaccatc
caaaaggctttgggggagacggtcaccctgggatgcacctacaccctcggccccgaagac
acgggagagctggacatcgagtggtccaatgttagcccggacatgacacagaaagaccaa
ctgcttttatcatatacagggggcctgacgatgcgctacggagaccccagcgtgaacaaa
aggctcaagttcatagtggaccccaagcagggtgacgcctccgtctctctctctaatctg
gttctcaaagacacggcaacctaccagtgtaaagtcaagaaggcccccggtgttgacatg
agaaaagtcacactgaatgtgatggttcccccaacatccccaaagtgttgggttgaaggc
ccggaggagaaaggtggtcctgtgtccctccgctgcaaatctagtcagggatccattcct
ctctcttacacgtggaggagagagagtggaggtgcgattccagccgacgccatccaaacc
ctagagactggagagcttttgataaagaaccatacggaccgcaacattggaagttacacg
tgtgaggtgaaaaatgccgtgggcaaaggacagtgtaaatatgcactgcatgcatacaac
cctaccaataaggtgggtatcatagtcggggcggtgataggtgccctcctgctactgctc
ctcctcctgctcctcatctggctcctggtctgctgctgcaataagcgtcgctatgagaaa
gaggttgaaaatgaaataagggaggacgccccggccccagagagcagacccaccagcagg
aactccagcagacactccagtttacgctcagtgatggcgtaccgcacccacccgggggtg
cagtacagcgatgtgaggaaacagctgcccagtgttagtgaatcggctcacggtggcgtc
tacacaggggagagtaacggcagatcacagccaaatactgcgggggggcgagcctccctc
aattatgacaatcgattcggatacgctgtgtaa
DBGET
integrated database retrieval system
