Trematomus bernacchii (emerald rockcod): 117473193
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Entry
117473193 CDS
T09643
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tben03009
]
117473193 (dhx37)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117473193 (dhx37)
Ribosome biogenesis [BR:
tben03009
]
Eukaryotic type
90S particles
Helicases
117473193 (dhx37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
ResIII
nSTAND3
ATPase
AAA_30
AAA_23
DUF4746
Motif
Other DBs
NCBI-GeneID:
117473193
NCBI-ProteinID:
XP_033974599
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MGKLRRKFNWKGRLQNDTQQPAEEEKTNVVVELQDGSRLKGVDQSNPLVLSANKAKKKKG
SLTPLSRKKPLTKKQRKELQKVLERKDKKAQRADILTKLAEVQVPESELKLLYTTSKLGT
GDKLYQTKQLPDEIKDGESAPKISSLSGANRKRKWKVEMDEDEVEESSDLDTSSEEEEEK
EVTETTEMTAAPPQEEKQEVQEKPHQTEQDGQNEKNISNQEKVENKMLSQPAVFIPVNRL
PEIQEARLKLPVLAEEQVIMEAVRENPFIVICGETGSGKTTQVPQFLYEAGYASGSGSGI
IGITEPRRVAAVSMSQRVAKEMNLSTRVVSYQIRYEGNVTGDTKIKFMTDGVLLKEIQKD
FLLQRYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLLVMSATLRVEDFTENT
KLFRTPPLVIKVEARQFPVSIHFNKRTPMDDYTGEVFQKTCKIHRMLPPGGILVFLTGQA
EVNNLCRQLRQAFPFRRGNTTNGEDEDADTSEAMRTFKKTKQKKTVSLPRIDLDNYSALP
VDEGDEDRDAGIGDEDYGGSDLEFGDDPASTEVKADPSIPLYVLPLYSLLDPEQQAKVFR
PPPPGARLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKISWTSQASANQ
RAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVEDLVLQMKDLNIDKVVNFPFPT
SPSTEALVAAEQLLVSLGALKEPPRSGSVKQMELARLSCPITPLGRAMASFPVAPRYAKM
LALGQQQDCLPYVIAVVAAMTVREIFEDLDRTAASEDESVKLAQRRARLNQMRRLWAGQG
ASLLLGDLMVMLGAVGACEFAGCTPKFCEENGLRYKAMVEIRRLRGQLTNAVNSVCPEVG
VFVDPKMAPPTEHQVVCLRQIVLAGLGDHLARRAQAEDILDQKWKMAYRTPLLDDPVFIH
PHSALFKTLPEFLVYQEIMETTKMYMRGVSAVEAEWIPELLPQYCHFGSPLESPSPWFSS
STGTIKCHCSSTFFRIAWPLPAVEKEYPEGLERYKLFSKFLLEGQVCPKLKKNGTHLLSN
PSIMLKSWAKLQPRTEALLGVLVSKRVDCRDALLSVWKDDEKFLLSAYCQWLPEAMHQEV
AKSWPPI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactaaggaggaaattcaactggaagggaagactgcaaaatgacacccaacaa
ccagctgaggaagagaagacaaacgttgttgtagaacttcaagatgggtccagacttaaa
ggagtagaccagagcaacccgttggtcctctcagccaacaaagccaagaagaagaaaggc
tcactgacgcctctctccagaaagaagcccctcaccaagaagcagaggaaagagctgcag
aaagtgctggagcgcaaagacaagaaagctcagagagcagacatcctgaccaaactggcc
gaagtgcaggtcccagagtctgaactcaagctgctgtacaccacgtccaaactgggaaca
ggagataaactttaccagaccaaacagttaccagatgaaataaaagatggagagtctgcg
ccaaagattagcagtctcagtggagcaaacagaaaaagaaaatggaaagtagagatggat
gaagatgaggtagaagaaagcagtgatctagacacctcatctgaggaggaggaggaaaaa
gaagtgactgagaccacagagatgacggccgctccacctcaggaagaaaaacaggaggtg
caggaaaaaccacatcaaacagaacaagatggacagaatgagaagaacatatcaaatcag
gagaaagttgaaaacaaaatgctgtcgcagccggccgtcttcattcctgtgaacagatta
ccagaaatacaggaggctcgtctgaagctgcctgtgctggcggaggagcaggtcatcatg
gaggcagtgagagaaaacccctttatcgtcatctgtggagagacaggaagtggaaagaca
actcaagtgcctcagtttctgtatgaagccggctatgccagtggcagtggcagtggaata
attgggatcacagaaccaagaagggtagcagctgtcagcatgtcccaaagagtggctaaa
gagatgaacctgtcaacacgggtggtgtcttaccagattcgatatgaggggaacgtgacc
ggcgataccaagatcaagttcatgacagatggtgttctgctgaaggagattcagaaggat
ttcctgctccagagatacagtgtgataattatagacgaagcgcacgagaggagtgtgtac
acagatatcctcattggactgttgtctcgaatcgtcccgctcaggaacaagaaaggtttg
cccatgaagctgctggtcatgtcggctactctgcgagtggaggacttcacagaaaacaca
aagcttttccggacgccgccacttgtcattaaggtggaagctcgccagttccccgtctct
atacatttcaacaaacgcaccccgatggatgattacaccggagaagttttccaaaagacc
tgcaagatccaccggatgctgcctccaggtggtatcctggtgtttctgaccgggcaggca
gaggttaacaatctgtgcagacaactgagacaagcttttcccttcaggaggggtaacact
actaatggtgaagatgaggatgcagacacctcagaggcaatgaggacgtttaagaagacc
aaacagaagaagactgtttctctgcctcgcatcgatctggataactattctgccctcccg
gtggatgaaggtgatgaagacagagatgcggggatcggagacgaagactatggtggctct
gatctggagttcggagacgatcccgccagcacagaggtgaaggctgacccctccattcct
ctctatgttctccctctgtactctctgttggacccagagcagcaggccaaggtgttcagg
cctcctccacctggagctcgtctgtgtgtggtagccaccaacgtggccgagacatctctg
accatcccgggcatcaagtacgtggtcgactgtggccgtgttaagaaacgtttctatgac
cgagtgaccggagtgtcgtccttcaagatctcatggacctcacaggcctcggccaatcag
agggcaggcagagcgggacgaacagagccgggacattgctacaggctgtactcgtctgca
gtatttggagacttcagtttgttctcagaggcagagatcacccgccggcctgtggaggac
ctggttttacagatgaaggacctcaacatagataaagtggtgaatttccccttccccacg
tctccctctacagaggctcttgtggcagcagagcagctgttagtctcactgggagctttg
aaagagccgcctcgcagtggaagtgtgaaacagatggagttagccagactgagctgcccc
atcacccccctgggcagagcaatggcttcgttccctgtggcaccacgctacgctaaaatg
ttagctcttggtcagcagcaggactgccttccttacgttatcgctgtggtagcagccatg
acagtcagggagatctttgaagacctagacagaactgctgctagtgaagatgagagcgtg
aagcttgctcagcgccgagctcggctgaaccaaatgaggaggctgtgggctgggcaagga
gcgtctctcctactgggggacctcatggtcatgctgggtgctgtgggagcttgtgaattt
gctggttgtactccgaagttttgcgaggagaacggcctgaggtataaagccatggtggag
atcaggaggctcagaggacaacttacgaatgcagtgaactcggtgtgtccagaggtggga
gtgtttgttgatccaaagatggccccgcccacagagcatcaggtggtgtgcttgcggcag
attgtcctggctggactgggagaccatctcgcacggcgagcacaggcagaagatatactc
gaccaaaaatggaagatggcatacaggacgcctcttctggacgacccggttttcattcat
ccccactctgcgctcttcaaaacgctgccggagtttctcgtctatcaggagatcatggag
accacaaagatgtacatgagaggtgtgtcagcagtagaagccgagtggattcccgagctt
ctgcctcagtattgtcattttggctcccctctggagtctccgtcaccgtggttctcttcg
tccaccggcaccatcaaatgtcactgctcaagcaccttcttccgtatagcttggccgctg
ccagcagtggagaaggaatatccagaaggactggagcgttacaaactgttctccaagttt
ctgcttgagggacaggtttgtcctaaactgaagaaaaacggcacccaccttctctcaaac
ccatccatcatgctgaaatcatgggcaaagctgcagcccaggacggaggctctgctggga
gtgttggtgtcaaagagggtagactgcagagatgccctcctctctgtctggaaagatgac
gaaaaatttctgttgtctgcatactgccagtggttaccggaagccatgcatcaagaagta
gccaaaagttggcctccgatctga
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