Trematomus bernacchii (emerald rockcod): 117473235
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Entry
117473235 CDS
T09643
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117473235 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117473235 (si:dkey-13n15.2)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117473235 (si:dkey-13n15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA_2
Motif
Other DBs
NCBI-GeneID:
117473235
NCBI-ProteinID:
XP_033974649
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MMDVPTANQSDTPCQPWAGQNGWSPASPQGPPCNPLPSFQHLSLSSPSDQRPGYEQLQVS
NHGYQSELATFSSRNNTEYSTLYANNADHSVQRVTPDAHASSMVPSASQGRYIPPCSLAL
MKEGTHPCKPQQMPFYSPHSPYQGISSPLQPPYTHHCSLNGPQSPQQKHLPITTLSFGVN
QSPQFTPQAAFERANVESSVGYTHNHSSPQQPQWTLTTNSRGTTNEFVPNAAAQDRNITP
QSPSSESRYGLDPELLPSVVKVIADDSAEWEGKVFVSEPFSRLPPLATTSCIIEDRGNAS
PLAIRSASYCMPCDAQTALLSRLPLGALVTPLAKQNDGEPLPVCTEPECVSSCGCCGASM
CPAMGWQDCGQRFYCPFCGKLSEVPWQHYQPTKGVEGARLDKDNRPELSMGSYEKVNSQK
GEPAALLLAIDVSASAVRGGHLEFATQQILTLLTSLKMEDGDVRVGLMTYDSRIHLYDLS
PALSRPHMLVITETEDLQLPVREGLLVPLKDCIDSIDSVLQLVPQFSPECDSSSGVPIEL
PVKAGLAVLQALSCPGKLLIFHTAPLTEMGLTHSSSGFFGSNKPKSIFQPSDPAISLAKE
CVSQGCGVSLFVLSQQDVGGAWPGHIPYLTGGALYTYSHLQGELDRERFSTDLNKILETD
TGYKAELRIFVSKDMRVSGCYGLFLPGPSPSQVTMATVDWRTTLAVELAHSRALDETRGV
AIQTVLSYSTRTGDRRTRVHTLTLRCSRHLQDTFRQYQAQTLLTFYSKKIYCTVLERPLQ
ELREELQTEVTEALASYRRHCCSATVSAGQLVLPQYLRALPVYINSLRKSEVLLPGLRSS
IHQRLQQRCQVLGMDTCSTSTHFYPLLLPLPLAANSSVSPPPPEALRCCAASLEPGCLYL
IHAPLTLLLWVGDQVPACTLVELFNNNCFSSLPSGETKLPVLDNPLSIRVRSLIGTLNSQ
APCARKLWVVKQGDTCEEALQRHLVEDKSPNGGASYADFLYHLHVNSVRLLQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtccccacagccaatcagagcgatacaccctgtcagccgtgggcgggccag
aacggctggtccccagcttcacctcaaggacctccctgcaaccctctgcccagttttcag
catctcagcctgagctctccttctgaccagaggcctggctacgagcagctgcaggtgtcc
aaccacggctaccagagcgaacttgcaaccttttcatccagaaacaacaccgaatacagc
acgctttatgctaataatgctgaccacagtgttcagcgggtcactcctgatgctcatgct
tcatccatggttccatctgcaagccaaggaagatatatacctccatgttctctcgctctt
atgaaggaagggacgcatccctgcaagccccaacaaatgcccttttactcccctcacagc
ccttaccaaggaatatcttcccctttacagcccccatacactcaccattgttcattaaat
ggacctcagtcaccccaacaaaaacatttgcccattactactttatcatttggtgtaaat
cagagtccacagtttacacctcaggctgcatttgagagggccaatgtggaatcctctgtt
ggatacacacacaatcattcctcgccacagcagcctcagtggactctcacaacaaactca
agagggaccacaaacgagtttgttcccaatgcggctgcacaggacaggaacatcactcca
cagtctcctagctctgagtctcgttatggtctggacccagagctcctgcccagtgttgtg
aaggtgatcgcagatgacagtgcagagtgggagggcaaggtcttcgtctcagagcccttt
tcccgtctccctcctctggcaactacctcctgtatcatagaggacagaggtaacgcgagt
cctttagccatccgctctgcgtcgtactgtatgccctgtgatgctcagactgctctgctc
agccgtctgccgctgggagctctggtcacccctctagccaagcaaaatgatggagagccc
ctgcctgtgtgcacagagccagagtgtgtttcaagttgtggttgttgcggagcctccatg
tgcccggcgatgggctggcaggactgtggtcagaggttttactgccccttctgcgggaaa
ctcagtgaagtgccgtggcaacactaccagcccaccaaaggggtggagggtgctcggttg
gataaagacaacaggcctgaactcagtatggggtcctacgagaaagttaattctcagaaa
ggtgaacctgccgccctgctcctagccatagatgtgtctgcgtccgcggtgagaggagga
catttggagtttgcaacacaacaaatactcactctgctcacatcgctgaagatggaggat
ggtgacgtccgtgtgggtttgatgacgtacgacagcaggatccacctgtacgacctcagc
cccgccctgtcccgcccacacatgctggtcatcacggagacagaagacctgcagcttcct
gtgagggaggggcttctggtgcccctgaaagactgtatagacagtatcgacagtgtgctg
cagcttgttcctcagttcagtccggagtgtgatagctctagtggagttcccatcgagctg
ccggtgaaagcagggctagccgtccttcaggctctgagttgtcctggcaagctgctgatt
ttccacactgctcctctgacagagatgggactcacacactcgtcctcagggttctttggc
tcaaacaaaccaaagtccatctttcagccgtcagatccagccatctcattggccaaggag
tgcgtcagtcaaggctgcggggttagcctgtttgtcctctcccagcaagatgtgggcggg
gcttggccggggcacataccatatctaacaggtggagctctgtacacctacagccacctc
cagggagagttggacagagaacgtttcagcactgatctaaacaagattttagagacggac
accggctacaaggctgagctcaggatctttgtcagcaaagatatgcgtgtgtccggctgt
tatggacttttcctccctgggcctagccccagccaggtcaccatggcgactgttgattgg
aggacgacgctggctgtagagctcgcacactccagagctctagacgagaccagaggtgtt
gccatacagactgttttgtcttacagcaccaggacaggagacaggaggaccagagttcac
actctgaccctgcgatgctctcgtcaccttcaggacactttccggcagtaccaggcccaa
acactgctcacattctacagcaaaaaaatttactgcacggtgttggagcgccctcttcag
gagctgagggaggaactgcagacggaggtcacagaggcgctggcatcttaccgcagacac
tgctgctccgctacagtgtctgctggacagctggtcctccctcagtacctgcgagcactt
cctgtttacatcaacagtctgaggaagagcgaggtgctgctgccgggcctgaggagctcc
atccaccagcgactgcagcagcgctgccaggtgctcggcatggacacctgcagcacctcc
actcacttctaccctctgctgctgcctctgccgctggcagctaacagctccgtctctcca
ccccccccggaggctctgcgctgctgcgcggccagcctggagcccggatgtctgtatctg
attcatgcacccctcacactgctgctctgggtgggtgaccaagtcccagcatgcaccctg
gtggaactcttcaacaacaactgcttctcttccctgccctctggagagaccaagctgcca
gttcttgataaccctctgtccatcagagtgcggtccctcatcggcactctgaactctcag
gctccctgtgcccgcaagctgtgggtggtgaagcagggtgacacctgcgaggaggccttg
cagcgccacttggtggaggacaaaagtcccaacggtggggcatcctatgcagacttcctc
taccatctccacgtcaactctgtccggcttctgcagtga
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