Trematomus bernacchii (emerald rockcod): 117473295
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Entry
117473295 CDS
T09643
Name
(RefSeq) upstream-binding factor 1-like protein 1
KO
K09273
upstream-binding transcription factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117473295
03021 Transcription machinery [BR:
tben03021
]
117473295
Transcription factors [BR:
tben03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
117473295
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
117473295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Myb_DNA-bind_6
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117473295
NCBI-ProteinID:
XP_033974703
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MSGTTTVPEESDTEWTKKDTQKLLAVMKTSILMKDLKSTYLKALKNVDWKEVAFDPFTPE
ACKKKWGEILQKLQKFRTLTELLVEAEDVISNPLMNTKIHPDHPKKPTPPNAIFCKENWV
SYHNKYPDIGQEKLFRRLANKYQALPDEEKAQYEEKFNLATVEYKKKKEEFKKQSRPNKR
KQLSDDSTDEEEQTEDAICLPPKPPFNGYHIFCKEQNMTGLPNNAYTGVWAQRWRDLTDR
EREQYSFRCRQMKREYAVKLKEYLKTFDQEEQQKILKKNGIKTPMQKRDVKKGPKKIPGE
PHKPPNANIIFCKKQMVLFKETYPNSRERFTKVNLMWRKLSYEDKNCFIQDVTENMKEYS
MKLQKWFKTLSRAQQESYRTSNPSKLKYLGENCTEEPFAYRHRIQKMKCLKTATASKNGR
CLTLKRTKKKMTKTSHLKCFRW
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggacgacaactgtgcctgaagaatctgatacagagtggaccaagaaagacacc
cagaagcttcttgctgtaatgaaaaccagcatcctaatgaaagacctaaagagcacatat
ttaaaagcactgaaaaatgtggactggaaagaagtggctttcgatcctttcactcctgaa
gcatgcaaaaagaaatggggagagattttgcagaagttgcagaagtttcggaccctcacg
gagctcctcgttgaagctgaagatgtcatttccaatcctttgatgaacacaaagattcac
ccagatcacccgaagaaacccactcctccaaatgccatcttttgcaaggagaactgggtc
agttatcataataagtacccagatatcggtcaagaaaagctattcaggcgtctagccaat
aagtaccaagcgctccctgatgaagagaaggctcaatatgaggagaagtttaatctcgca
acagtggaatacaagaaaaagaaggaggagttcaaaaaacaatcgagacccaataagagg
aaacaactctcagacgacagcacagatgaagaagagcagactgaagatgcaatctgcctg
cctcccaaacctccattcaatggctatcatattttctgcaaagagcaaaacatgacgggt
ttaccaaacaatgcctacaccggtgtgtgggcccaacgctggagagacttgactgacaga
gagagggaacaatacagcttccgctgcagacagatgaagagggagtacgcggttaagctg
aaggaatatttaaagacttttgaccaggaggagcagcagaagatcctgaaaaagaatggc
atcaaaactccaatgcaaaagcgtgatgttaaaaaaggtccaaagaagattcctggcgag
ccccacaaacctcctaatgctaatataatattctgcaaaaagcagatggtacttttcaag
gagacatatccaaactcaagggagcgattcaccaaggtcaatctaatgtggagaaaactc
tcctatgaagacaagaattgcttcatacaggatgtaactgaaaacatgaaagagtactcg
atgaagctgcagaagtggtttaagacattgtcaagagcacagcaggagtcttatcggacc
agtaacccctccaaattgaaataccttggtgaaaattgcactgaagaaccatttgcctac
agacatcggattcagaagatgaaatgtttgaagacagcaacagcgagcaagaatggaaga
tgtttgactttgaagaggacgaagaagaagatgacgaaaacatcacatttgaaatgtttt
agatggtga
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