Trematomus bernacchii (emerald rockcod): 117473299
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Entry
117473299 CDS
T09643
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tben04990
]
117473299 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
tben04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117473299 (lrit1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
fn3
ig
Ig_2
LRR_14
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
117473299
NCBI-ProteinID:
XP_033974706
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSRHFTAAFCLALVVLPLLCSSCPAQCSCFYHKLSDGSKARSVLCNDPEITVVPPNFPSD
TSKLRIEKTAITRISSDNFHYLNNLEFLWMSFNSLNSLNVDSFRGLHNLDELRLDGNSLT
SFPWESLTDMPTLRLLDLHNNKISAIPADATIYIKNLTYLDLSSNTLNTVPSEVLTLWLS
VKPSQEADSSKLILGLHDNPWMCDCRLYDLVQFQKSPSSSVALIDTRLRCADPESLSGVL
FTEAELQRCQGPRVHTAVARVRSSLGNNVLLRCGTVGVPIPELSWSRADGKKMNGTIQEE
ISKEGIIWSILSVPAVAYRDSGKYVCKATNFVGTADAIISLVITDSIQSEESIAAVSKKT
RGKKPGGMGRAAYQEKLIARYVPPSTTAAARPIIEPLNGKGVTGKYKIESYSISDGASEG
KGKAADPQKPVEVDALSNLAANASSLQKVPEKRVVRSVKVIGDTDHTVSLNWRAPTATNI
TEFSVLYAVFGERDMRRLNVAAGKNRITIAGLVPKTKYIACVCVKGLIPKKEQCVIFSTD
EAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRESKEIQDSYVTFET
LGPGAKGKGVEGEYLTRMNPDESNRLLSARSSVDSEATARNEGPPNEYFC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacattttactgctgctttttgtctggctttagttgttctccctttgttgtgc
agttcatgtcctgcacaatgcagctgcttctaccacaaattaagcgacggatcaaaagca
aggagtgtactttgcaatgacccagagatcactgtggttcctccaaattttcccagtgac
acatcgaagctgcgaattgaaaagacagcaatcacacggatttcaagtgacaacttccac
tacctcaacaacctggagtttttgtggatgtcttttaattcactgaattcactgaatgtg
gacagtttccggggtctgcacaacctggatgagctccggctagatggcaattctctgacc
tctttcccctgggagtctctgactgacatgccaaccctgaggctcctggacttacacaac
aacaagatctccgccatcccagccgatgccactatttacataaagaatctcacctatctg
gatttatccagcaacactcttaacacagttccctctgaagttctcacattgtggctgagt
gtgaagccatcccaggaagcagattcctctaaactaattctcggtctccatgacaatccg
tggatgtgtgactgccgactgtacgatctggtccagtttcagaaatctccatcatcatct
gttgctctcatcgacaccaggctgcggtgcgctgatccagagagtttgtcaggggttctt
ttcactgaggcggagctgcagaggtgtcagggcccacgggtgcacacggccgtggctcgt
gtacgctcgtcactgggcaacaacgtcctgctgcgctgtggcacagttggagtccccatt
cccgagctgtcctggagccgcgctgatggcaagaagatgaacggcaccattcaggaagag
atttcgaaggagggcatcatatggtcgattctgagtgtccctgcagtcgcctacagagat
tctgggaaatatgtgtgcaaagcaaccaacttcgtgggcactgcagacgccattatctct
ttggtgatcacagattccattcagtcggaggaatcgattgctgctgtctccaagaaaaca
agagggaagaaacctgggggcatgggaagagcggcataccaggagaaacttattgccaga
tacgttcctccatcaaccaccgcagctgctcggcccataatcgaacctctaaatggcaaa
ggagtcactgggaagtataagattgaaagctacagcatctctgatggtgcttctgagggt
aaaggcaaggcagcagaccctcagaaaccggtggaggtggacgctctgagcaacctagca
gccaatgcctcatccttacagaaagttccggagaaaagggtagtgcgatcggtgaaagtg
attggcgacacggaccatactgtctctttgaactggcgagcccctacagccacaaacatc
acagaattcagcgtcctttatgctgtatttggcgagagagacatgcgtcggctgaacgta
gccgcggggaagaaccgaatcaccattgccggtcttgtgcctaaaacaaagtacattgct
tgtgtttgcgtcaaaggcctgatcccgaaaaaggagcagtgtgtaatcttctcaacagat
gaagcagccagtgctagcggcactcagaagctcattaatgtggtggtgataacagtggca
tgtgtgatcgccgtccccctgacactgatcgtgtgctgcggggcgttaaaaaagcgctgc
aaaaagctgctggggcgagagtccaaagaaattcaggactcgtacgtaacgtttgagacc
ctgggccccggggccaaaggtaaaggggtggagggcgagtatctgaccaggatgaaccct
gatgaatccaacaggttgctctcagcgaggtccagtgttgactccgaggccacagccagg
aatgaggggccacctaacgagtacttctgctaa
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