Trematomus bernacchii (emerald rockcod): 117473390
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Entry
117473390 CDS
T09643
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117473390 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117473390 (faap100)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117473390 (faap100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCAA
DAHL
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
117473390
NCBI-ProteinID:
XP_033974851
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MDRRCAVETFAEFGFAGTSCTPRISCGFGTDVLLCTGSDEAYVFSTQERKLKAVLQCPGP
VTDLVVSHDKQRLYVACRSGVYCVSSQLLLSRVKGSPADASSGPSELKISSESLVVAEEG
VLSLLLVGSVLVTLSQRDASWMLTLYKSSNYEKLSSFSQVSGDVNTEEKTEIRRSPVLIC
VHSSDATPSSSSSNSSSDEAPNQGHFHLDSVLFKLLFGVDVALAKSPVILCGLPDGCVCF
VPLRLPGSRLRVLHSLEQPVVFVGSSGPGQCLVAVGELGRVVLMKADKGGSAEGRGKVFI
EGCVPGPVVCGCVDKNTLYYSTGSDLLLLDLSEGTSGEEGQGKDEETRRKMDAALQSPTS
LNVCRVVALAPPTCNTAAPGVVELLGLSVRGQLQRIRLPVRTEDSRLSSGSDSQVGRSVR
DLLSSIGDVCERASVLKTSIKSKNQILQHLNQVLNISFLLMAGANGEEHPPLQENPIRCR
ASTSWSRLLQEDSLTLTCVLDNSSAYVLERGWTLSITVFPLCPPPSAGGENLSTNVSFPF
QNLHPGEMLEVALPIAAAGESSFPVTVSCSLLFSLTSLLGEEAANLPALQSSCISLPLNT
LTVDWLHALQVSSSKAAQEKITPHATDAIEAFLRSHRIRCGGKAEGGGEGGLKYSASVRV
SAELLRDTLMVVKSSDLDPAGTKTAPANVCLSLLEWLLSEGPGGVTTGQKGDTIALRGSV
VHAQSLNRHAVKLTAKEVNVGVEESLNTVEVQVHSSSIAAVCGLHHAVLRRVQTLLQRAP
ERAASTKRVQSLGLRKALQRAEHLLQQIQQSRVSGVFSGGASTEQMSRTLLDVYRELREN
PLLII
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggacagacggtgtgctgtggagacttttgcagagtttggctttgcaggaacctcgtgc
acacccaggatcagttgtggtttcgggacagatgtgctcctctgcactggaagcgacgag
gcttatgttttcagcactcaggagaggaaactcaaggctgtcctccagtgtcctggtcct
gtgactgacctggttgtgagtcatgataagcagcgcctctatgtagcctgtaggagcgga
gtctattgtgtcagttcacaacttctgctatccagggttaaaggctccccagctgatgca
tcctctggtccatctgagctgaaaatctcctctgagtctctggtcgttgcagaggaagga
gtgttatcgctgctcctcgtcggctccgtgctagtgactctttcccaaagagacgcatcc
tggatgttgactctatacaagtcctcaaactacgagaagctcagctctttcagtcaggtc
tcaggagatgtaaacactgaggaaaaaacagaaataagacgaagtccggtgctgatttgt
gttcattcaagtgatgcaaccccatcgtcctcctcctctaattcctcatcagatgaagct
ccaaatcagggccattttcacctcgattcagtcctcttcaaacttctttttggggtcgat
gtcgccctcgccaaatcccccgttatcctgtgcggccttccagacgggtgcgtgtgtttc
gtccctctgcgtctcccaggatcgaggctccgagtcctgcacagcctggagcagcccgtc
gtatttgtcggatcatcgggtccaggacagtgtttggtggcagtgggtgaactggggagg
gtggtgctgatgaaagccgacaaaggagggtcagcagagggaagagggaaggtttttatt
gaggggtgtgtaccggggcctgtggtgtgtggctgtgtggataaaaacactctttactac
agcactgggtcagacctgctgctactggatctatcagaggggacatctggagaggaaggc
caaggaaaggatgaggaaacacgcagaaagatggacgctgccctccaaagccccaccagt
ttaaatgtgtgtcgagtcgtcgctttggccccgccgacatgcaacactgcagctccaggt
gtggtggagctgctgggtctgtctgtcagagggcagctgcagaggatccgtctccctgtg
aggacagaggacagcagattgtcctcggggtcagactctcaggtcggccgcagcgtcagg
gacctgctgtcctccatcggggacgtctgtgaaagagcatctgtgctgaaaacatccatc
aaatccaaaaaccagattctccagcacctgaatcaagtgctcaacatcagcttcctgttg
atggcaggtgcaaacggtgaagagcatcctcccctccaggagaacccaatcagatgtcga
gcttcgaccagttggagcagattgcttcaggaagactccctgaccctcacatgtgtcctg
gataactccagtgcttatgttttggagcgaggctggacattaagcatcactgtgtttcct
ctgtgtcctcctcccagtgcaggaggagaaaacctctccacaaacgtttcattcccgttc
caaaacctccatccaggcgagatgttagaagtggctttgcctatagcagctgcaggcgaa
tcatccttccccgtgacagtgagctgctccctcctcttctccctcaccagcctcctggga
gaggaagctgcaaaccttcccgctctgcagagcagctgcatcagtttgcccctgaacacc
ctgacagtggattggctgcacgccctgcaagtgagcagctctaaagccgcccaggaaaag
atcacacctcatgcgacagatgccattgaagcttttcttagatcacatcgaatacggtgc
ggtggaaaagcagagggaggaggagaaggtggtttaaagtattcagcaagtgtacgggtg
tctgcagagttgctaagggacacacttatggtggtaaaaagctcagatttagaccctgca
gggacaaagacggctcctgcaaatgtgtgcctttctctgctggagtggctgctgtctgaa
ggtcctggaggagtgacgacgggacaaaaaggagacacaatcgcattgaggggatcagtg
gtgcatgcacaaagtctaaacagacatgctgtcaaactgactgccaaagaggtaaatgta
ggggtggaggagtccctgaacacagtggaggttcaggttcacagctcgtctatagcagcc
gtgtgtggactgcaccacgctgtgctgcggcgagtacagactctgctgcagagagctcca
gagagagccgcgtccacaaagagggtccagagtttggggttaagaaaggcgctgcagcgg
gctgagcacctgttgcagcagatccagcaaagtcgagtgtctggggtcttcagtgggggg
gcgtccacggagcagatgagccgaacgcttctcgacgtttaccgagaactcagagaaaac
cctctccttataatctaa
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