Trematomus bernacchii (emerald rockcod): 117473392
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Entry
117473392 CDS
T09643
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00330
Arginine and proline metabolism
tben00480
Glutathione metabolism
tben01100
Metabolic pathways
tben04148
Efferocytosis
Module
tben_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
117473392 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
117473392 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117473392 (odc1)
Enzymes [BR:
tben01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
117473392 (odc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
117473392
NCBI-ProteinID:
XP_033974882
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
METATEFDFSFLEEGFSARDIVEQKINESSMTDDRDAFYVCDLGDVFKKHLRWVRALPRV
TPFYAVKCNDSQAVVMVLASLGAGFDCASKTEIHMVQSLGVDPSRIIYANPCKQLSQIKY
ASAHGVRMMTFDSEVELMKVARCHENAKLVLRIATDDSKAVCRLSVKFGVTLKACRGLLE
KAKELGLDVIGVSFHVGSGCTDPETYSQAIADARYVFDIGAEVGFNMDLLDIGGGFPGSD
DNELKFEEITAVISPALDKYFPADTGIKIISEPGRFYVASAYTLVVNIIAKKVIMDEESA
SDEEDEGTTDRTLMYYVNDGVYGSFNCILYDHAHCLPTLHKKPKPDQVRYPCSIWGPTCD
GLDRIVEQCYLPDMQVGDWLIFDNMGAYTVAAASTFNGFQRPDIYYVMSRTAWQHVQQIC
SQGMPAPAEESSLLEVPACCGRESSLEMPTKPCQAPVV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgccaccgagtttgacttctctttccttgaggagggcttctctgcacgggat
atcgtcgagcagaagatcaatgagtcatccatgacggatgacagggatgccttctacgtc
tgcgacttgggggatgtcttcaagaagcacctgcgctgggtgagggccctgccacgcgtc
actcccttctacgccgtcaaatgcaacgacagtcaggctgtagtcatggtactggcctcc
ctgggagctggcttcgactgtgcaagcaagacggagattcatatggttcagtctttggga
gtggatccaagcagaatcatctatgccaacccctgcaagcaactttcccagatcaagtac
gcatccgcccacggggtccggatgatgacctttgatagcgaggtggaactcatgaaagtg
gcccgctgtcatgaaaatgccaagctggtgctgcgtattgccacagatgactctaaggct
gtgtgtcgcctgagcgtgaagtttggtgtgacactcaaagcgtgtcgaggtctcctggag
aaagctaaggaactggggctggatgtgattggcgtcagcttccatgttggcagtggctgc
accgatcccgagacctactctcaggcgatcgctgatgcccgttatgtcttcgatataggg
gctgaggtgggcttcaacatggacctgctggacatcggaggtggatttcctggttcagat
gataatgaactcaaattcgaagagatcactgcagtcatcagcccagccctggataagtat
ttccccgctgacactggcattaagatcatttctgagccaggacgcttttatgtggcttct
gcttacacactggttgtcaacatcatcgccaagaaggtcatcatggacgaggaatctgcc
tctgacgaggaagacgaggggaccacagataggaccctgatgtactacgtaaacgatggc
gtttatggatccttcaattgtatactctatgaccatgctcactgtttgccaacactacat
aagaagccaaagccagatcaggtcagatacccctgcagtatctggggcccgacatgtgat
ggactcgatcgcatcgtcgagcagtgctacctgcctgacatgcaggtaggcgactggctg
atctttgataacatgggggcctacaccgtggccgctgcctccaccttcaatggcttccaa
cgacccgacatttattacgtcatgtctcgcactgcctggcaacacgtgcagcagatctgt
tcccagggcatgccagctcctgcggaggagtcctccctgttggaggtgccggcctgctgt
ggacgagagagcagcttggagatgcccactaagccctgccaggcccctgtggtgtaa
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