Trematomus bernacchii (emerald rockcod): 117473492
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Entry
117473492 CDS
T09643
Symbol
thrab
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
tben04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117473492 (thrab)
04081 Hormone signaling
117473492 (thrab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117473492 (thrab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117473492 (thrab)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117473492 (thrab)
Nuclear receptors [BR:
tben03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
117473492 (thrab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117473492
NCBI-ProteinID:
XP_033974975
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Position
Unknown
AA seq
428 aa
AA seq
DB search
MEHVPKEQDPNPSEGEEKRWLNGPKRKRKNSQCSLKSMTARCLSDSSKSPELKEANKDGY
IPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKI
TRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENRQRRKKEEMVKTLQNRPEPTD
SEWEVIHLVTEAHRHTNAQGAQWKQKRKFLPEKIGQSPAAPTSDGDKVDLEAFSEFTKII
TPAITRVVDFAKKMPMFSDLPCEDQIILLKGCCMEIMSLRAAIRYDPESETLTLSGEMAV
KREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCMDKIEKCQ
ETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFL
EVFEDQEV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgtgcccaaggagcaggaccctaacccatcagagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagagaaagaacagccaatgttcgttgaagagtatgactgca
cgttgtctgagtgacagctccaaatcccccgagctgaaagaagcgaataaagacgggtac
atccccagctacctcgaaaaggatgagccgtgtgtggtttgtggcgacaaggccacaggc
taccactaccgctgcattacctgcgagggctgcaagggcttcttccgtaggaccattcag
aagaacctccaccccagctactcctgtaagtacgatggctgctgcatcatcgacaagatc
acccgcaaccagtgtcagctttgccgcttcaagaagtgcattgcagtgggcatggccatg
gacttggtgctggatgactcgaagcgggtggctaaacggcgtctgattgaagagaacagg
cagcgacgcaagaaagaggaaatggtgaaaaccctccaaaaccgtccagagcccactgac
agcgagtgggaggtgatccacctggtgacggaggcccaccggcacaccaacgctcagggc
gcacagtggaaacagaagcgcaaattcctgccagagaaaatcggccagtccccggctgct
cccacgtcagacggagacaaggtggacctggaggccttcagcgagttcaccaagatcatc
actcctgccatcacccgtgtcgtcgactttgccaaaaaaatgcccatgttctctgaccta
ccgtgtgaagaccagatcatcctgttgaagggctgctgcatggagatcatgtcgctgcga
gccgccatccgctacgaccccgagagtgagacgctgacgctgagtggggagatggccgtg
aagcgggagcagctgaagaacggcgggctgggcgtggtgtcggacgccatcttcgatctg
ggcaagagcctggcgcagttcaacctcgacgacacagaggtggcgctgctacaggccgtg
ctgctcatgagctcagatcgctctggcctgacctgcatggacaagatcgagaagtgccag
gagacctacctgctggcgtttgagcactacatcaactaccgcaagcacaacattcctcac
ttctggccgaagctcctaatgaaggtgaccgacctgcggatgatcggggcgtgccacgcc
agccgcttccttcacatgaaggtggagtgtcccaatgaactcttccccccgctcttcctg
gaggtcttcgaggaccaggaggtgtga
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