Trematomus bernacchii (emerald rockcod): 117473509
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Entry
117473509 CDS
T09643
Symbol
epas1a
Name
(RefSeq) LOW QUALITY PROTEIN: endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04140
Autophagy - animal
tben04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117473509 (epas1a)
04137 Mitophagy - animal
117473509 (epas1a)
04148 Efferocytosis
117473509 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117473509 (epas1a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117473509 (epas1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117473509
NCBI-ProteinID:
XP_033975003
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MTADKEKRRAISREAARRRRRVESEVFEDLSRLLPLQQSVRDHLDKPSVIRLTLSYIRMH
TLLTGKTGTKAEASHKVKCGQVTDGQMVRHEFNGGCGEEEKERYDADASEETNMYLRILE
GFMMVLSTEGDMIYLSDNVSKYMGLTQAELMGHNIFEFSHPCDHEELRNNLRVTAEEVWS
GGKRDFVMRIKSALTHRGRSANLKSATWKVLHCQGRSKVCVAPSSVSCLLLTCQPLPLSH
TLLSTQTFTSQHSMDMRFTYCDQRMTLLLGYSTEELLGRSIYDLCHTRDTNCLTKNHFNL
CFKSQSASGRYRMLVRGGGYVWVESHSAVIPNARSSKSRPSANQPLCILCVTYVLSGVEE
PSLQLSLDQTVHI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaaggagaagagaagggcgatcagccgggaggcggccagacggaggcga
cgggtggaatctgaggtgtttgaagatttgtctcgcctcctgccgctccaacagtctgtc
cgagatcaccttgacaagccctcagtgatccgcctcactctcagctacatccgcatgcac
acactgctcacagggaagacagggaccaaagcagaggctagtcacaaagtaaaatgtgga
caggtgacagatggtcaaatggttcggcatgagttcaacggaggatgtggcgaggaagag
aaagaaaggtatgatgcagacgcctcggaagagacaaacatgtacctgaggatcctggag
ggatttatgatggtcttgtccacagagggagacatgatctacctgtctgacaacgtcagc
aagtacatgggcttgacgcaggctgagctgatgggacacaatatttttgagttttctcac
ccctgtgaccacgaagaactcagaaataatctacgtgtaacagcagaggaagtttggagc
ggtggaaagagggactttgtcatgaggataaaaagcgctctgacacacagaggaagaagc
gccaacctcaagtcagctacgtggaaggttctccactgtcagggccgatccaaggtgtgt
gtcgccccgtcttcagtttcctgccttctgctgacctgccagcctctgcccctctcacac
acactcctcagcacacagaccttcaccagccagcacagcatggacatgaggttcacatac
tgtgaccagagaatgactctgcttctaggttacagcactgaggagctgcttggccgctcc
atctatgatctctgccacacacgggacacaaactgtttgaccaaaaatcatttcaacttg
tgttttaagagtcagtcggccagcggtcggtacaggatgctggtgagaggtggaggttat
gtctgggtggagagtcacagtgcagtcatccccaacgctcgctcctccaagtccaggccc
agcgccaaccagccactgtgcatcctctgtgtcacctatgtcctcagtggagtggaggag
ccgtccttgcagctctctttggatcagactgtccatatctga
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