KEGG   Trematomus bernacchii (emerald rockcod): 117473534
Entry
117473534         CDS       T09643                                 
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90 isoform X1
  KO
K24759  WD repeat-containing protein 90
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tben03037]
    117473534 (wdr90)
Cilium and associated proteins [BR:tben03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   117473534 (wdr90)
SSDB
Motif
Pfam: WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_1st CFA20_dom Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_NUP159_NUP214 Cytochrom_D1 SGL WDR54 Laa1_Sip1_HTR5
Other DBs
NCBI-GeneID: 117473534
NCBI-ProteinID: XP_033975038
LinkDB
Position
Unknown
AA seq 1844 aa
MASKGWQHPYVNIFKHVRVEDWKRSAKEGEVSTCTDKRLKCSVFRIRGPVPANSFIMIPK
NINQSLGLTGRFFYLLFRPTPGKYFVVHLDVSVEEGQVVRISFSNMFKEFKSTATWLQFP
FLCGAAKDSVYESTAKSARHGLVGPAPTSVRWTCLTLDLQYALSVYLNRCYSQLKSIKLC
ANMAVKNMFTSNLLLDPGLSFSEAKLMGLVSSEGTGPVPRDMSFPVPKGGSWHDLYDHIR
FPSEGTKLPFDSIQKDPPRPEASCVSDQRRPIREEPCFVSLSKPVQDRVSLIQQITAPKS
IPRNQPPMVVTEIPELGLVSTHHSDDSLGQNTDQHQQETTSSEQFTPRPFWDTDDGGVHV
HLHPEDGFSQHGEESEQEVVCTPVPRPVHLSSSNESRQQKLLPDPILRLNRIIGFGGATT
KYALWSKSGDEVVYPCHAIIVSMKISSNQQRFFIGHTDKVSALAFNGNTTLLASAQTGSH
SVVRVWDYHKGKCLAMSRIHAHSLSSLSFSYSGGILCGVGKDSHNKTMVVVWNTMNVSKG
GEVSIIAKAHTDVDIHTMKVAFFDDTRMVSCGRDNIRLWRVRNGTLRSCPVNLAEYHSLD
FTDVAFEEGNSFHQHLDDRTLFASSRSGYIFEIDYSRVVVRNVRRLLPAQQQHADHREKQ
TFNSGPGIAINSISVSSSFCATGSEDGFLRLWPLDFSAVFLEAEHEGPVSLVSVSSDSLQ
VLAATSTGNLGFLDVSSRGYNTLMRSHTDTVLGFSVDGIRRHLTSASSDGTVRIWNMDSL
HQLYDFASEDSPCSVAFHPSEQVFSCGFSSGIVRVFDISAAKLLAEHKQHRGEVVGLAFS
PDGEFMYSADSQGSLALYNASEEDLNVIRVVCNVVARGTEHAPDALAVSSDSRCLAFIGP
SEYIVTIADSRSLDELLHVDVSILDVQSPRLDSALRVCFSPASTEHLLVATSSNKILWVS
TKTGRLLREVSKVHKHQCSSLAVSEDSRFLLTAGHNAVKVWDYNMQLHINSQMFIGHSQP
IRQVGFTPDQLGVVSVGDAIFLWDFLALPVDSLTDSRSPLVIRHTPAPKSVQPHTEVNGV
RLSNGMPRRTAPLPSSPPPRLDISTLDLVDQGVLGSLSISDDPPTVPPASVADPSSDPRP
SSSFLRVTELTHTSPLNSSLTDAVELKGKKPVRPDCYRHFIPRFKTSTLDQAAVAPQAGE
EGIKLKAVIGYNGNGRSNMVWSPDRGLFAYSCGCVVVVEYLHTGSQRHLQGHSEEISCLA
VTHDAQTVASAAGGSNGSRSLICIWDVQNGTCRSTISYHRGVQSLAFSRDDRFFLSVGDF
SEPAVALWSSKTFQLLSSVSVSGPLHDAAFSPSAAGQLACVGRQGAFFCLIHTQGSDVDL
KVQRVKAPSEVGEVELTALCYHTDSVLFTATNRGHVCVWDVNTQRCFMTWEADEGEIGVL
LCRGNHLLTGSNTRWLRLWEVEAVRGVKPQEKVCIGEDSGTSVVLEQEIMLDGTTVSAAF
DTSMDMGIVGTTAGTLWYINWSDCSSIRLVSGHKTQVNDVVFSSDERQFATCSEDGSVRV
WSAPSNELVVQFQVLNQACGCVCWSPSSSTESACVAGGYSDGTLRIFRLSSSEMEMKLHP
HQVAVTAIQYSADGHVILSAGKNGLVAVSSPMNGATIRIIRDHKGAPITTIQCVNEQCKN
LELEGKEMWLAASADRRVSVWAADWLNDKCDLLDWLTFPAPAYIGDDSPPPSLAAFCPAD
PGLVVYTGYGVEKELSFYSLAKKQIIKTIALPDWATCLSLSCHSQLIAVGSKGRVLKLIK
SSSGRFQDFLQHSDSLQTCRFSPSGKLLFTVAYNEILLWEVQDL
NT seq 5535 nt   +upstreamnt  +downstreamnt
atggcctccaaaggttggcagcatccttacgtcaacatattcaaacatgtcagggttgaa
gactggaaacggtcggccaaagagggggaagtgtcaacatgcacggacaagcgcctgaag
tgctcagtgttcaggatcagaggtcctgttcctgccaacagcttcatcatgatacccaaa
aacatcaaccagtctctggggctgaccggtcgcttcttctaccttctcttcaggcccacc
cccggaaaatactttgtggtccacctggatgtttctgtcgaggagggccaggtggtccgt
atctctttttccaacatgttcaaagaatttaaatccacggctacctggcttcagtttcct
ttcttgtgcggagctgcaaaggattcagtctatgaaagcacagctaaatctgcaagacac
ggtttagtgggtcctgctcccacgtcagtgcgttggacctgtctgacgctggatctgcag
tacgctctctccgtctacctcaaccgctgctacagtcaactcaaaagcattaagctttgt
gccaacatggcagtaaaaaacatgttcaccagcaacctgctgctagatccaggtctttcc
ttcagtgaagccaagctgatgggtctggtttcttctgagggaacgggtcccgtccccaga
gacatgtcatttcctgttcccaaaggaggctcctggcacgacctctacgatcacatcagg
tttccctcagagggaacgaagctaccctttgactccattcaaaaagaccctcccaggccc
gaggctagttgtgtctctgaccaaagaagaccaattagagaggagccttgctttgtcagc
ctcagcaaacccgttcaggaccgagtgtccctcatccagcagatcaccgctccaaaatca
atcccaaggaatcaaccccccatggtggtgactgaaatcccagagctaggtctagtttct
actcaccacagtgatgattccctcggccaaaatactgaccagcatcagcaggagacaact
agttcagagcagttcacacccaggcccttctgggacaccgatgacgggggcgttcatgtg
caccttcatcctgaggacggcttcagccaacacggggaggaaagtgaacaagaggttgtt
tgcactccagttccacgcccggtgcatctatcatcatccaacgaaagcagacagcagaag
ctgctcccagaccccattctcaggctcaatcgaatcatcggcttcggaggagccactact
aaatatgccctgtggagcaaatcaggtgatgaagttgtgtatccgtgtcacgcaatcatc
gtctccatgaagatatcgtctaaccagcagagattcttcatcggccacactgataaggtc
tctgctctggcttttaatggcaacacaacactgctggcctcagcacaaaccggcagccac
agtgtagtcagagtgtgggattaccataagggaaagtgtctggccatgtccaggattcat
gctcattcattgtcctctctgagcttctcatacagcggtggtattctctgtggagtgggt
aaagatagccacaataaaactatggtggtcgtctggaacactatgaacgttagtaaaggt
ggagaagtgagcattatagccaaagctcacacagatgtggacatacacaccatgaaggtg
gccttctttgatgatacaagaatggtgtcatgtggtcgtgataatatccgcctgtggaga
gtgaggaatggaacgctgcgctcctgtcccgtcaacctggctgaataccactcactggac
ttcaccgatgtggcctttgaggagggaaactctttccaccagcatcttgatgatcgaaca
ctatttgccagcagtcggagtggctacatctttgagatcgactacagcagagtggttgtt
agaaacgtcaggcggctgttgcctgctcagcagcagcatgcagaccacagggagaaacag
acttttaactcaggtccaggcattgccatcaacagcatcagtgtgtcctcatcattttgc
gccacaggctctgaggatggcttcctgagactctggcccctggatttttccgctgtcttc
ctggaggctgagcatgaaggacctgtgagcctggtgtcagtctcttctgacagccttcaa
gtgctggcagccacctccactggtaacctgggtttcctcgatgtgagcagccgcggttac
aacacgctgatgaggtcacacactgacacggtgctcggcttcagcgtggatggcatccgc
cggcatctcacctcagcctcctccgacggcaccgtgcgcatttggaacatggattccttg
catcagttgtatgatttcgcgtcagaggacagcccctgctcagtggctttccatcccagc
gagcaggtcttctcttgtggcttcagctccggcatcgtcagagtcttcgacatctccgct
gccaagctgctggctgaacacaagcagcacagaggtgaagtggtgggtctggccttctca
ccggacggggagttcatgtacagcgctgactctcagggctctctggcactttacaacgcc
tcagaggaagacctcaacgtgatcagagttgtgtgtaatgtggtggctcgaggcactgag
cacgctccagacgctctcgctgtgagcagcgacagccgctgtctggctttcatcggcccc
tcggagtacatcgtcaccatcgctgactcgcgctctctggatgagttgctccatgtagat
gtgagtattttggacgtgcagagcccccgtctggattctgctctgagggtctgcttctct
ccggcctccactgaacacttgttggtcgccacatcttctaacaagatcctctgggtcagc
accaagacaggccgcctgctccgagaggtgtccaaggtgcacaaacaccagtgctcgtcc
ctggctgtgagtgaggacagtcggttcctgctgacagcgggacacaatgctgtcaaagtg
tgggattacaacatgcagctccatataaactcacagatgtttatcggccacagtcagcca
atccgccaggtgggcttcacccccgaccaactgggcgtggtctcagtgggagacgccatc
ttcctttgggacttcctggcacttcctgtcgactctttgactgacagccgttcacctctg
gtaataagacacacccctgctcctaaatcagttcaaccacacactgaagtgaatggagtt
cggttgtccaatgggatgcctcgacggacggctcctcttccctcctctccgccaccacga
ctcgacatcagcaccctcgacctagttgaccagggggttttgggctccttgtcgatatct
gatgaccccccaacagtcccacccgcttcagttgcagacccttcctctgaccccagacct
tcatcctccttcctcagagtcacagagctgacccacacatctccactcaactcaagtctt
acggacgctgttgagttgaaaggaaagaagccagtacgtcctgattgttacaggcacttc
attccacgcttcaagacctccactctggatcaggctgcagtggctcctcaggcaggagaa
gagggcataaagctgaaagcagtcatcggctacaatggaaacggccgtagcaacatggtg
tggagccctgaccgaggtttgtttgcgtactcgtgtggctgcgtggtggtggtggagtat
cttcacacaggaagtcagagacacctgcagggccacagcgaggagatctcttgtctcgca
gtcacgcatgatgcacagacggtggcatcagcagctggaggcagtaacggcagcaggagc
ctcatctgcatttgggacgtccagaatggaacctgtcgaagtaccatctcataccacagg
ggggtgcagagtctggccttctcaagggatgatcgcttctttctctctgttggagacttc
tctgagccagcggtggctctgtggagcagtaagaccttccagctgctgtccagtgtgagt
gtgtcggggccgctccatgacgcagcgttcagcccctccgcagccggccagctggcctgc
gtgggccgccagggggctttcttctgcctgatccacacacagggttcagatgtagacctc
aaggtgcagagggtgaaagccccctcagaggtgggcgaggtggagctgacggcgctgtgc
taccacaccgactccgtcctgttcaccgccaccaatcgaggacacgtttgcgtctgggac
gtaaacacacagcgctgcttcatgacctgggaggccgatgagggagagattggagtgctg
ctgtgtcgggggaaccatctgttgacgggcagcaacacccgctggttgcgtctgtgggag
gtagaagctgttcggggtgtgaagcctcaggaaaaggtctgcatcggggaagacagtggc
acctcggtggtgttggagcaggagataatgctggacgggacgacggtcagcgctgcgttt
gatacctcgatggacatgggcatcgttggcaccacagcgggaaccctctggtacatcaac
tggtcggactgcagcagcatccggctggtcagcgggcacaagacccaggtgaatgatgtg
gtgttcagctctgacgagagacagtttgccacctgcagcgaggacggcagtgtgagggtg
tggtcggcgcctagcaacgagctggtggtgcagttccaggtgctcaaccaggcctgtggc
tgcgtgtgctggagcccttcttccagcacagagagtgcatgtgtggctggaggatacagc
gatgggactctgaggatcttcaggctttcctcctcagagatggagatgaagctgcatcct
catcaagtggccgtcactgccatccagtactcagctgacggtcatgtgatcctttcagcg
gggaagaatggtctggtggctgtcagcagcccgatgaatggagcgactattcgtataatc
cgggatcacaaaggagccccgattaccaccatccagtgtgtgaatgaacagtgtaagaat
ctcgaactcgaaggaaaggagatgtggttggctgccagtgctgacagacgcgtcagtgtg
tgggctgctgattggctgaatgacaaatgtgatctacttgactggctgacatttcctgct
cccgcctatatcggggatgacagcccacctcccagcctggctgccttctgccccgcagac
cccggcctggtggtctacaccggctatggagtggagaaagagctgtcgttctacagcctg
gcaaagaaacagataatcaaaacgattgcccttcccgactgggccacatgcttaagcctc
tcctgtcacagccaactcatagctgtgggatcaaaagggcgggtgttgaagctgatcaag
tcgtccagcggcaggttccaggacttcctgcagcacagcgactcgctgcagacgtgtcgc
ttctcgccttcagggaagctcctcttcactgtagcttataatgagatcctgctgtgggag
gtgcaggacctctga

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